RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 DERL2Q9GZP9 239 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 PIF1Q9H611 641 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 ZNF229Q9UJW7 825 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 ZNF840PA6NDX5 716 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 H0Y858 1186 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 NTRK1P04629 796 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 ANXA4P09525 319 aaPredicted RBP11.81□□□□□ -0.52
PTPRF-205ENST00000414879 ITPKAP23677 461 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 TALDO1P37837 337 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 UGT2B15P54855 530 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 SOX4Q06945 474 aaPredicted RBP11.81□□□□□ -0.52
PTPRF-205ENST00000414879 TEAD2Q15562 447 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 TMC8Q8IU68 726 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 ZC3H7AQ8IWR0 971 aaKnown RBP11.81□□□□□ -0.52
PTPRF-205ENST00000414879 RPL10LQ96L21 214 aaKnown RBP11.81□□□□□ -0.52
PTPRF-205ENST00000414879 APOLD1Q96LR9 279 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 RHBGQ9H310 441 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 PNMA8CA0A1B0GUJ8 204 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 LCHNA4D1U4 455 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 PTGESO14684 152 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 ERAL1O75616 437 aaKnown RBP11.81□□□□□ -0.52
PTPRF-205ENST00000414879 NUDT14O95848 222 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 HSPA7P48741 367 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 RPS6KA3P51812 740 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 PRR5P85299 388 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 SLC18A2Q05940 514 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 BIKQ13323 160 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 TIGD2Q4W5G0 525 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 FAM171BQ6P995 826 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 ADAMTS15Q8TE58 950 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 KCNJ9Q92806 393 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 KCNN1Q92952 543 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 MYDGFQ969H8 173 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 B3GALT6Q96L58 329 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 SLITRK2Q9H156 845 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 ABCG4Q9H172 646 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 RIMKLBQ9ULI2 386 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 PSMD13Q9UNM6 376 aa11.81□□□□□ -0.52
PTPRF-205ENST00000414879 RHPN2P1A8MT19 583 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 MYL12BO14950 172 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 COCHO43405 550 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 SIN3BO75182 1162 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 FAM155BO75949 473 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 RASGRP1O95267 797 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 TPP2P29144 1249 aaPredicted RBP11.8□□□□□ -0.52
PTPRF-205ENST00000414879 LGALS3BPQ08380 585 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 BNIP1Q12981 228 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 ARSIQ5FYB1 569 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 SPATA6LQ8N4H0 392 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 KLHL23Q8NBE8 558 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 FBXO30Q8TB52 745 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 ZSCAN18Q8TBC5 510 aaPredicted RBP11.8□□□□□ -0.52
PTPRF-205ENST00000414879 COL26A1Q96A83 441 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 CLN6Q9NWW5 311 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 CDC14AQ9UNH5 594 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 RGPD3A6NKT7 1758 aaPredicted RBP11.8□□□□□ -0.52
PTPRF-205ENST00000414879 RGPD4Q7Z3J3 1758 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 OR2AG2A6NM03 316 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 STX16-NPEPL1H3BU86 382 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 STX16O14662 325 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 KMOO15229 486 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 FFAR2O15552 330 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 ATP1B2P14415 290 aaPredicted RBP11.8□□□□□ -0.52
PTPRF-205ENST00000414879 BMP7P18075 431 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 SLC7A2P52569 658 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 PRKAG1P54619 331 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 NRG1Q02297 640 aaPredicted RBP11.8□□□□□ -0.52
PTPRF-205ENST00000414879 CCDC157Q569K6 752 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 PLEKHS1Q5SXH7 462 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 TMEM63BQ5T3F8 832 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 MBOAT1Q6ZNC8 495 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 ZC3HC1Q86WB0 502 aaKnown RBP11.8□□□□□ -0.52
PTPRF-205ENST00000414879 HIPK1Q86Z02 1210 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 DENND6AQ8IWF6 608 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 C1orf50Q9BV19 199 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 GSDMCQ9BYG8 508 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 PRR5-ARHGAP8B1AHC4 643 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 MAN2B1O00754 1011 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 SLC16A5O15375 505 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 ST13P50502 369 aaKnown RBP11.8□□□□□ -0.52
PTPRF-205ENST00000414879 STC1P52823 247 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 MAPK12P53778 367 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 ERVK-8P63133 956 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 ARHGAP8P85298 464 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 UBAP2LQ14157 1087 aaKnown RBP11.8□□□□□ -0.52
PTPRF-205ENST00000414879 PPM1JQ5JR12 505 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 FAM26DQ5JW98 314 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 IL23RQ5VWK5 629 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 C11orf65Q8NCR3 313 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 IMP4Q96G21 291 aaKnown RBP11.8□□□□□ -0.52
PTPRF-205ENST00000414879 FAM83CQ9BQN1 747 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 FNDC11Q9BVV2 318 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 SRMSQ9H3Y6 488 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 SLC32A1Q9H598 525 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 SPHK2Q9NRA0 654 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 ZNF282Q9UDV7 671 aaPredicted RBP11.8□□□□□ -0.52
PTPRF-205ENST00000414879 DNAJB4Q9UDY4 337 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 A0A1B0GW55 424 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 SOBPA7XYQ1 873 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 DCLK1O15075 740 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms