RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 C10orf62Q5T681 223 aaPredicted RBP16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 HID1Q8IV36 788 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 FLCNQ8NFG4 579 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 MARK4Q96L34 752 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 ACAT2Q9BWD1 397 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 RGS17Q9UGC6 210 aaPredicted RBP16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 K7EPI3 171 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 MYL12AP19105 171 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 GPAT3Q53EU6 434 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 WDR45BQ5MNZ6 344 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 ERLEC1Q96DZ1 483 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 SPHK2Q9NRA0 654 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 TK2O00142 265 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 TNFP01375 233 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 HOXB2P14652 356 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 CCR4P51679 360 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 CDC42P60953 191 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 GSTM4Q03013 218 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 SRSF11Q05519 484 aaKnown RBP16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 CCDC92Q53HC0 331 aaPredicted RBP16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 GCNT7Q6ZNI0 430 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 PLEKHM3Q6ZWE6 761 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 SCML4Q8N228 414 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 ADAMTS15Q8TE58 950 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 TWIST2Q8WVJ9 160 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 RCN3Q96D15 328 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 AGAP2Q99490 1192 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 MYADML2A6NDP7 307 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 C2orf71A6NGG8 1288 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 SRPRAP08240 638 aaKnown RBP16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 WDR4P57081 412 aaKnown RBP16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 KCNJ11Q14654 390 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 C2orf27AQ580R0 203 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 EIF3MQ7L2H7 374 aaKnown RBP16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 SMARCD2Q92925 531 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 WNT6Q9Y6F9 365 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 COMMD3-BMI1R4GMX3 469 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 KAT6AQ92794 2004 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 ZNF840PA6NDX5 716 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 PGM3O95394 542 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 UMPSP11172 480 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 TTKP33981 857 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 C9orf64Q5T6V5 341 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 ISLR2Q6UXK2 745 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 ZNF605Q86T29 641 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 ZC3H7AQ8IWR0 971 aaKnown RBP16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 CPNE9Q8IYJ1 553 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 ZNF513Q8N8E2 541 aaPredicted RBP16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 C7orf57Q8NEG2 295 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 PSKH2Q96QS6 385 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 NOL11Q9H8H0 719 aaKnown RBP16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 COPG1Q9Y678 874 aaKnown RBP16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 COCHO43405 550 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 GDF10P55107 478 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 SOX4Q06945 474 aaPredicted RBP16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 TIMM50Q3ZCQ8 353 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 SIRPB2Q5JXA9 342 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 APOLD1Q96LR9 279 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 FAM83CQ9BQN1 747 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 DCUN1D5Q9BTE7 237 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 POPDC3Q9HBV1 291 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 MYH6P13533 1939 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 H0YGN5 161 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 GTPBP1O00178 669 aaKnown RBP16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 TCF3P15923 654 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 SLC1A2P43004 574 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 ARRB1P49407 418 aaPredicted RBP16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 PLEKHG4Q58EX7 1191 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 BANPQ8N9N5 519 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 POLR3HQ9Y535 204 aaPredicted RBP16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 NFS1Q9Y697 457 aa16.57■□□□□ 0.24
PCDHA13-202ENST00000409494 KERAO60938 352 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 TMEM63AO94886 807 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 BCL10O95999 233 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 TIE1P35590 1138 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 CHST15Q7LFX5 561 aaPredicted RBP16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 CACNG4Q9UBN1 327 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 PTGESO14684 152 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 KMOO15229 486 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 ZNF24P17028 368 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 HSPA7P48741 367 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 SP140Q13342 867 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 BLMHQ13867 455 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 ARL13AQ5H913 290 aaPredicted RBP16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 MMAAQ8IVH4 418 aaKnown RBP16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 FAM20CQ8IXL6 584 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 SLC38A2Q96QD8 506 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 FBXL12Q9NXK8 326 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 ANKRD36CQ5JPF3 1778 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 A0A0J9YYE9 177 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 SUV39H1O43463 412 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 NR1H2P55055 460 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 C16orf72Q14CZ0 275 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 MTX3Q5HYI7 312 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 LRRC70Q7Z2Q7 622 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 FSTL5Q8N475 847 aaPredicted RBP16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 SPATA6LQ8N4H0 392 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 C12orf66Q96MD2 445 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 PTPN18Q99952 460 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms