RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 NME5P56597 212 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 GTF2H2Q13888 395 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 CCNIQ14094 377 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 PHKG1Q16816 387 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 REP15Q6BDI9 236 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 GTF2H2CQ6P1K8 395 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 HIPK4Q8NE63 616 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 SLC26A7Q8TE54 656 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 SCAMP4Q969E2 229 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 ASB16Q96NS5 453 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 ELOVL2Q9NXB9 296 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 PTBP2Q9UKA9 531 aaKnown RBP20.37■□□□□ 0.85
USP39-203ENST00000409470 TMPRSS11EQ9UL52 423 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 SLC27A6Q9Y2P4 619 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 BAG2O95816 211 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 ANPEPP15144 967 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 GPX3P22352 226 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 FSHRP23945 695 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 CCR7P32248 378 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 GCKP35557 465 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 VHLP40337 213 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 ETV3P41162 512 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 HSPA7P48741 367 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 ERVPABLB-1P60509 514 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 RPS6KA2Q15349 733 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 AAGABQ6PD74 315 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 SCIMPQ6UWF3 145 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 LRRC74BQ6ZQY2 392 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 Q6ZVL8 140 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 MIER2Q8N344 545 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 ST13P5Q8NFI4 369 aaPredicted RBP20.37■□□□□ 0.85
USP39-203ENST00000409470 SMARCD2Q92925 531 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 ACOX2Q99424 681 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 WWOXQ9NZC7 414 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 KLHL42Q9P2K6 505 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 C16orf96A6NNT2 1141 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 ATP1B2P14415 290 aaPredicted RBP20.36■□□□□ 0.85
USP39-203ENST00000409470 SHHQ15465 462 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 FGF13Q92913 245 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 S100A14Q9HCY8 104 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 CACNA2D2Q9NY47 1150 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 DKK3Q9UBP4 350 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 ANGPTL3Q9Y5C1 460 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 FBP2O00757 339 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 TAPBPO15533 448 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 RPSAP08865 295 aaKnown RBP20.36■□□□□ 0.85
USP39-203ENST00000409470 PBX2P40425 430 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 SLC6A11P48066 632 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 THOP1P52888 689 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 DCDC1P59894 354 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 PIGGQ5H8A4 983 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 RARS2Q5T160 578 aaKnown RBP20.36■□□□□ 0.85
USP39-203ENST00000409470 SULT1C3Q6IMI6 304 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 LETMD1Q6P1Q0 360 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 GET4Q7L5D6 327 aaPredicted RBP20.36■□□□□ 0.85
USP39-203ENST00000409470 ETFBKMTQ8IXQ9 262 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 VN1R2Q8NFZ6 395 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 METTL6Q8TCB7 284 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 PYDC1Q8WXC3 89 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 DLG3Q92796 817 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 NXPE3Q969Y0 559 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 RAD18Q9NS91 495 aa20.36■□□□□ 0.85
USP39-203ENST00000409470 CFAP99D6REC4 459 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 KPNA3O00505 521 aaPredicted RBP20.35■□□□□ 0.85
USP39-203ENST00000409470 MRASO14807 208 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 NRP2O60462 931 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 MTX2O75431 263 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 OTCP00480 354 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 DPP6P42658 865 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 PSME3P61289 254 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 HSPA14Q0VDF9 509 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 TAF11Q15544 211 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 ZNF423Q2M1K9 1284 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 FNDC3BQ53EP0 1204 aaKnown RBP20.35■□□□□ 0.85
USP39-203ENST00000409470 ERAP2Q6P179 960 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 SPATA19Q7Z5L4 167 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 HCAR2Q8TDS4 363 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 SKA2Q8WVK7 121 aaPredicted RBP20.35■□□□□ 0.85
USP39-203ENST00000409470 NRG4Q8WWG1 115 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 ANKRD27Q96NW4 1050 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 IPPKQ9H8X2 491 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 RIC8BQ9NVN3 520 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 SMOXQ9NWM0 555 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 ADA2Q9NZK5 511 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 DEC1Q9P2X7 70 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 PPM1HQ9ULR3 514 aa20.35■□□□□ 0.85
USP39-203ENST00000409470 HEPACAM2A8MVW5 462 aa20.34■□□□□ 0.85
USP39-203ENST00000409470 PRRT4C9JH25 899 aa20.34■□□□□ 0.85
USP39-203ENST00000409470 OR7A17O14581 309 aa20.34■□□□□ 0.85
USP39-203ENST00000409470 KATNA1O75449 491 aa20.34■□□□□ 0.85
USP39-203ENST00000409470 CAPN1P07384 714 aa20.34■□□□□ 0.85
USP39-203ENST00000409470 IDO1P14902 403 aa20.34■□□□□ 0.85
USP39-203ENST00000409470 AOAHP28039 575 aa20.34■□□□□ 0.85
USP39-203ENST00000409470 MESP2Q0VG99 397 aa20.34■□□□□ 0.85
USP39-203ENST00000409470 LRP8Q14114 963 aa20.34■□□□□ 0.85
USP39-203ENST00000409470 GSTA3Q16772 222 aa20.34■□□□□ 0.85
USP39-203ENST00000409470 MUM1Q2TAK8 710 aa20.34■□□□□ 0.85
USP39-203ENST00000409470 XKR7Q5GH72 579 aa20.34■□□□□ 0.85
USP39-203ENST00000409470 DPPA4Q7L190 304 aa20.34■□□□□ 0.85
USP39-203ENST00000409470 FUNDC1Q8IVP5 155 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms