RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 GLT6D1Q7Z4J2 308 aa12.76□□□□□ -0.37
SMARCB1-203ENST00000407082 TMEM126BQ8IUX1 230 aa12.76□□□□□ -0.37
SMARCB1-203ENST00000407082 CLYBLQ8N0X4 340 aa12.76□□□□□ -0.37
SMARCB1-203ENST00000407082 PGAM4Q8N0Y7 254 aa12.76□□□□□ -0.37
SMARCB1-203ENST00000407082 POU5F2Q8N7G0 328 aa12.76□□□□□ -0.37
SMARCB1-203ENST00000407082 CATSPER1Q8NEC5 780 aa12.76□□□□□ -0.37
SMARCB1-203ENST00000407082 FIBINQ8TAL6 211 aa12.76□□□□□ -0.37
SMARCB1-203ENST00000407082 DLG3Q92796 817 aa12.76□□□□□ -0.37
SMARCB1-203ENST00000407082 LRIG1Q96JA1 1093 aa12.76□□□□□ -0.37
SMARCB1-203ENST00000407082 LENG8Q96PV6 779 aaPredicted RBP12.76□□□□□ -0.37
SMARCB1-203ENST00000407082 OR52B2Q96RD2 323 aa12.76□□□□□ -0.37
SMARCB1-203ENST00000407082 OLFM1Q99784 485 aa12.76□□□□□ -0.37
SMARCB1-203ENST00000407082 MUC3BQ9H195 1237 aa12.76□□□□□ -0.37
SMARCB1-203ENST00000407082 ZBTB26Q9HCK0 441 aa12.76□□□□□ -0.37
SMARCB1-203ENST00000407082 FSCN3Q9NQT6 498 aa12.76□□□□□ -0.37
SMARCB1-203ENST00000407082 FBXO10Q9UK96 956 aa12.76□□□□□ -0.37
SMARCB1-203ENST00000407082 IGSF10Q6WRI0 2623 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 CXorf51AA0A1B0GTR3 108 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 CCDC162PA2VCL2 907 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 NEMP1O14524 444 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 TRIM24O15164 1050 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 UBDO15205 165 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 ZBTB14O43829 449 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 VPS26AO75436 327 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 TRIM16O95361 564 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 WISP3O95389 354 aaPredicted RBP12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 BAG2O95816 211 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 FGF4P08620 206 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 CISD3P0C7P0 127 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 EPHA3P29320 983 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 SCNN1BP51168 640 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 EPHB1P54762 984 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 HERVK_113P63132 956 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 KLC1Q07866 573 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 ZNF460Q14592 562 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 GRAMD4Q6IC98 578 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 CUZD1Q86UP6 607 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 SNX32Q86XE0 403 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 ZNF557Q8N988 423 aaPredicted RBP12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 OR7D4Q8NG98 312 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 PIP4K2CQ8TBX8 421 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 AGR3Q8TD06 166 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 MAPK15Q8TD08 544 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 DNAJC1Q96KC8 554 aaKnown RBP12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 ZNF570Q96NI8 536 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 NR1H4Q96RI1 486 aaPredicted RBP12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 TRIB3Q96RU7 358 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 NDNQ99608 321 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 ZNF184Q99676 751 aaPredicted RBP12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 CCT7Q99832 543 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 ERVK-6Q9BXR3 956 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 DERL2Q9GZP9 239 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 ZNF385DQ9H6B1 395 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 CCDC86Q9H6F5 360 aaKnown RBP12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 SPATS2LQ9NUQ6 558 aaKnown RBP12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 TMEM74BQ9NUR3 256 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 NMRK1Q9NWW6 199 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 EVLQ9UI08 416 aaPredicted RBP12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 MBD1Q9UIS9 605 aaPredicted RBP12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 TRAF6Q9Y4K3 522 aa12.75□□□□□ -0.37
SMARCB1-203ENST00000407082 TBC1D3BA6NDS4 549 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 BBIP1A8MTZ0 92 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 MEI4A8MW99 385 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 H7C0S8 307 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 SDHDO14521 159 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 AIM2O14862 343 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 STX7O15400 261 aaKnown RBP12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 SRP72O76094 671 aaKnown RBP12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 SUPT7LO94864 414 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 KAT7O95251 611 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 APODP05090 189 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 CD1DP15813 335 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 CR2P20023 1033 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 HLA-FP30511 346 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 GMPRP36959 345 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 GRIA2P42262 883 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 PTGER3P43115 390 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 NUDT2P50583 147 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 ZNF140P52738 457 aaPredicted RBP12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 AP1S1P61966 158 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 MESP2Q0VG99 397 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 BLMHQ13867 455 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 PDCD2Q16342 344 aaPredicted RBP12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 MMEL1Q495T6 779 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 ZNF678Q5SXM1 525 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 LYPLAL1Q5VWZ2 237 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 RNF219Q5W0B1 726 aaPredicted RBP12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 CERS6Q6ZMG9 384 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 NUDT18Q6ZVK8 323 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 CHSY3Q70JA7 882 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 ISCA2Q86U28 154 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 SYT12Q8IV01 421 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 PGBD3Q8N328 593 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 PHTF2Q8N3S3 785 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 FRMD1Q8N878 549 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 WFDC5Q8TCV5 224 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 DTX3LQ8TDB6 740 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 EZH1Q92800 747 aaPredicted RBP12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 KIAA1191Q96A73 305 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms