RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 HPS6Q86YV9 775 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 MCEMP1Q8IX19 187 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 RBM12BQ8IXT5 1001 aaKnown RBP11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 TMEM102Q8N9M5 508 aaPredicted RBP11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 FAM71BQ8TC56 605 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 NAT14Q8WUY8 206 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ERGIC2Q96RQ1 377 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 TLR10Q9BXR5 811 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ZFYVE1Q9HBF4 777 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 C5AR2Q9P296 337 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 NFKBIL1Q9UBC1 381 aaPredicted RBP11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 SPO11Q9Y5K1 396 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 COPG1Q9Y678 874 aaKnown RBP11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 GPR89AB7ZAQ6 455 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 SLC4A1P02730 911 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 GPR89BP0CG08 455 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 VARSP26640 1264 aaKnown RBP11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ZNF165P49910 485 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 PDE1BQ01064 536 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 GBE1Q04446 702 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ZBTB17Q13105 803 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 BECN1Q14457 450 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 NFE2L1Q14494 772 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 LLGL1Q15334 1064 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 FKBP15Q5T1M5 1219 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 IGFL3Q6UXB1 125 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 Q6ZS92 163 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 MRGPREQ86SM8 312 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 KCNMB4Q86W47 210 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 KMT5CQ86Y97 462 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 SYTL1Q8IYJ3 562 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 RASGEF1AQ8N9B8 481 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ST6GALNAC3Q8NDV1 305 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 CCHCR1Q8TD31 782 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 UBE2Q2Q8WVN8 375 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 FATE1Q969F0 183 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 TSGA13Q96PP4 275 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 INSM2Q96T92 566 aaPredicted RBP11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ZSCAN5AQ9BUG6 496 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 LATS2Q9NRM7 1088 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 HRASLS2Q9NWW9 162 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 MYO1AQ9UBC5 1043 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 LIMA1Q9UHB6 759 aaKnown RBP11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 BTRCQ9Y297 605 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ZNF711Q9Y462 761 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ACANP16112 2415 aa11.59□□□□□ -0.55
SPTLC1P3-201ENST00000403408 UBA6A0AVT1 1052 aaPredicted RBP11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 OR6C74A6NCV1 312 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 SLC9B1P1A6NJY1 282 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 HCRTR1O43613 425 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 VEGFDO43915 354 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 CTSBP07858 339 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 FERP16591 822 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 DESP17661 470 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 CES1P23141 567 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 OTX2P32243 289 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 SERPINB6P35237 376 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 GLRBP48167 497 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 DMPKQ09013 629 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 TMEM115Q12893 351 aaPredicted RBP11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 DPYSL3Q14195 570 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 NCF4Q15080 339 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 KYNUQ16719 465 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 TRAPPC5Q8IUR0 188 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 LRRC49Q8IUZ0 686 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 PQLC3Q8N755 202 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 TEKT4Q8WW24 435 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 TADA1Q96BN2 335 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 CEP41Q9BYV8 373 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 HAUS4Q9H6D7 363 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 BPIFA1Q9NP55 256 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 OSGIN2Q9Y236 505 aa11.58□□□□□ -0.56
SPTLC1P3-201ENST00000403408 VPS13CQ709C8 3753 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 H3BMH7 237 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 KCNK1O00180 336 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 UGT1A9O60656 530 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 POP7O75817 140 aaKnown RBP11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 ZBTB11O95625 1053 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 KLK3P07288 261 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 MTHFD1P11586 935 aaKnown RBP11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 UGT1A6P19224 532 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 UGT1A1P22309 533 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 UGT1A4P22310 534 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 CCNCP24863 283 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 GSDMDP57764 484 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 UBXN1Q04323 297 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 MYBPC3Q14896 1274 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 NOMO1Q15155 1222 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 HGSNATQ68CP4 663 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 PDPK2PQ6A1A2 396 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 CYB5D1Q6P9G0 228 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 GALNT16Q8N428 558 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 LILRA3Q8N6C8 439 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 BEND7Q8N7W2 519 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 CD180Q99467 661 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 ILKAPQ9H0C8 392 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 UGT1A7Q9HAW7 530 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 UGT1A10Q9HAW8 530 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 UGT1A8Q9HAW9 530 aa11.57□□□□□ -0.56
SPTLC1P3-201ENST00000403408 AMACRQ9UHK6 382 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms