RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 MUSKO15146 869 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 ABCB7O75027 752 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 ZBTB11O95625 1053 aaPredicted RBP19.57■□□□□ 0.72
CCDC47-202ENST00000403162 ALPLP05186 524 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 PRSS56P0CW18 603 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 PORP16435 677 aaPredicted RBP19.57■□□□□ 0.72
CCDC47-202ENST00000403162 MAP4P27816 1152 aaKnown RBP19.57■□□□□ 0.72
CCDC47-202ENST00000403162 ELK4P28324 431 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 SOX11P35716 441 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 AGTR2P50052 363 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 PRKG2Q13237 762 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 RBM48Q5RL73 367 aaKnown RBP19.57■□□□□ 0.72
CCDC47-202ENST00000403162 C6orf136Q5SQH8 315 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 FBXL22Q6P050 247 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 SCN4BQ8IWT1 228 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 RAB2BQ8WUD1 216 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 BTN2A3PQ96KV6 586 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 HGH1Q9BTY7 390 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 C1orf50Q9BV19 199 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 CCDC68Q9H2F9 335 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 GPN2Q9H9Y4 310 aaPredicted RBP19.57■□□□□ 0.72
CCDC47-202ENST00000403162 GNPTGQ9UJJ9 305 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 NPEPPSL1A6NEC2 478 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 PRAMEF11O60813 436 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 HPRP00739 348 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 ALDH2P05091 517 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 PIRTP0C851 137 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 RAP2AP10114 183 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 THRBP10828 461 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 ZNF182P17025 639 aaPredicted RBP19.56■□□□□ 0.72
CCDC47-202ENST00000403162 FMO4P31512 558 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 SHMT2P34897 504 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 BMXP51813 675 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 ZNF140P52738 457 aaPredicted RBP19.56■□□□□ 0.72
CCDC47-202ENST00000403162 YWHAHQ04917 246 aaPredicted RBP19.56■□□□□ 0.72
CCDC47-202ENST00000403162 ZNF235Q14590 738 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 TGFBIQ15582 683 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 RBBP7Q16576 425 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 OTUD3Q5T2D3 398 aaPredicted RBP19.56■□□□□ 0.72
CCDC47-202ENST00000403162 XAF1Q6GPH4 301 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 TMEM214Q6NUQ4 689 aaKnown RBP19.56■□□□□ 0.72
CCDC47-202ENST00000403162 UGT3A1Q6NUS8 523 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 DLEU7Q6UYE1 221 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 ITIH5Q86UX2 942 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 ZBTB8BQ8NAP8 495 aaPredicted RBP19.56■□□□□ 0.72
CCDC47-202ENST00000403162 NRBF2Q96F24 287 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 RDH12Q96NR8 316 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 V9GYQ6 96 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 NDST3O95803 873 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 EEF1B2P24534 225 aaKnown RBP19.56■□□□□ 0.72
CCDC47-202ENST00000403162 MAGEA8P43361 318 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 SLC11A1P49279 550 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 YBEYP58557 167 aaPredicted RBP19.56■□□□□ 0.72
CCDC47-202ENST00000403162 PHEXP78562 749 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 TRAF2Q12933 501 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 SLC44A4Q53GD3 710 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 TMEM240Q5SV17 173 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 ALG1LQ6GMV1 187 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 SLC2A7Q6PXP3 512 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 AFTPHQ6ULP2 937 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 GPRIN3Q6ZVF9 776 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 ZC3H7AQ8IWR0 971 aaKnown RBP19.56■□□□□ 0.72
CCDC47-202ENST00000403162 DTWD1Q8N5C7 304 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 FNDC5Q8NAU1 212 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 CHPT1Q8WUD6 406 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 TRUB1Q8WWH5 349 aaKnown RBP19.56■□□□□ 0.72
CCDC47-202ENST00000403162 SNX19Q92543 992 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 TMBIM1Q969X1 311 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 MAGED4Q96JG8 741 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 TRIB3Q96RU7 358 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 ACOX2Q99424 681 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 TDRD1Q9BXT4 1180 aaKnown RBP19.56■□□□□ 0.72
CCDC47-202ENST00000403162 ING2Q9H160 280 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 HEBP1Q9NRV9 189 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 ZNF711Q9Y462 761 aa19.56■□□□□ 0.72
CCDC47-202ENST00000403162 BOLA2-SMG1P6H3BVE0 249 aa19.55■□□□□ 0.72
CCDC47-202ENST00000403162 ARNTLO00327 626 aa19.55■□□□□ 0.72
CCDC47-202ENST00000403162 BTN3A1O00481 513 aa19.55■□□□□ 0.72
CCDC47-202ENST00000403162 SYNCRIPO60506 623 aaKnown RBP19.55■□□□□ 0.72
CCDC47-202ENST00000403162 ATP6AP1LQ52LC2 224 aa19.55■□□□□ 0.72
CCDC47-202ENST00000403162 FAM98BQ52LJ0 330 aaKnown RBP19.55■□□□□ 0.72
CCDC47-202ENST00000403162 RAP1GAP2Q684P5 730 aa19.55■□□□□ 0.72
CCDC47-202ENST00000403162 PSRC1Q6PGN9 363 aaPredicted RBP19.55■□□□□ 0.72
CCDC47-202ENST00000403162 C16orf87Q6PH81 154 aa19.55■□□□□ 0.72
CCDC47-202ENST00000403162 SCIMPQ6UWF3 145 aa19.55■□□□□ 0.72
CCDC47-202ENST00000403162 THAP5Q7Z6K1 395 aa19.55■□□□□ 0.72
CCDC47-202ENST00000403162 GPR21Q99679 349 aa19.55■□□□□ 0.72
CCDC47-202ENST00000403162 FBXO44Q9H4M3 255 aa19.55■□□□□ 0.72
CCDC47-202ENST00000403162 PIF1Q9H611 641 aa19.55■□□□□ 0.72
CCDC47-202ENST00000403162 SOBPA7XYQ1 873 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 TMEM189-UBE2V1I3L0A0 370 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 B4GAT1O43505 415 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 BCL10O95999 233 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 SERPINF2P08697 491 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 OCM2P0CE71 109 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 OCMP0CE72 109 aaPredicted RBP19.54■□□□□ 0.72
CCDC47-202ENST00000403162 GSTM2P28161 218 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 TPP2P29144 1249 aaPredicted RBP19.54■□□□□ 0.72
CCDC47-202ENST00000403162 ZIK1Q3SY52 487 aaPredicted RBP19.54■□□□□ 0.72
CCDC47-202ENST00000403162 SLC39A12Q504Y0 691 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms