RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 ACMSDQ8TDX5 336 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 NCSTNQ92542 709 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 YIPF4Q9BSR8 244 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 MTRRQ9UBK8 725 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 MFN2O95140 757 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 TAS2R50P59544 299 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 PDK4Q16654 411 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 RASSF6Q6ZTQ3 369 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 IQCF2Q8IXL9 164 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 SLCO1B3Q9NPD5 702 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 PCDHGC3Q9UN70 934 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 CHRNA1P02708 482 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 WASHC2DQ5SRD0 308 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 P4HA3Q7Z4N8 544 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 CAMK1DQ8IU85 385 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 MYDGFQ969H8 173 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 SAR1AQ9NR31 198 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 A8MUI8 341 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 PSMG1O95456 288 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 CD247P20963 164 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 HCAR2Q8TDS4 363 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 SLC25A36Q96CQ1 311 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 AGAP2Q99490 1192 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 LDAHQ9H6V9 325 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 NUDT4Q9NZJ9 180 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 NCDNQ9UBB6 729 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 NSG1P42857 185 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 FASTKD3Q14CZ7 662 aaKnown RBP11.22□□□□□ -0.61
TTC28-201ENST00000397906 TMC8Q8IU68 726 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 TMEM145Q8NBT3 493 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 SRFBP1Q8NEF9 429 aaKnown RBP11.22□□□□□ -0.61
TTC28-201ENST00000397906 GPR151Q8TDV0 419 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 CKAP2Q8WWK9 683 aa11.22□□□□□ -0.61
TTC28-201ENST00000397906 TCRBV21S2A2A0A5A6 115 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 BIRC5O15392 142 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 IL10RBQ08334 325 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 PYCR2Q96C36 320 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 APOBEC3GQ9HC16 384 aaKnown RBP11.21□□□□□ -0.61
TTC28-201ENST00000397906 A0A0J9YVX5 310 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 BTNL10A8MVZ5 291 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 NELFEP18615 380 aaKnown RBP11.21□□□□□ -0.61
TTC28-201ENST00000397906 DRG2P55039 364 aaKnown RBP11.21□□□□□ -0.61
TTC28-201ENST00000397906 VWA5B1Q5TIE3 1220 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 GALNT18Q6P9A2 607 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 METTL27Q8N6F8 245 aaPredicted RBP11.21□□□□□ -0.61
TTC28-201ENST00000397906 GPR88Q9GZN0 384 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 CKLFQ9UBR5 152 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 TMEM98Q9Y2Y6 226 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 OR2T12Q8NG77 320 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 OR2L5Q8NG80 312 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 MARCH7Q9H992 704 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 C3orf18Q9UK00 162 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 MMP20O60882 483 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 DBTP11182 482 aaKnown RBP11.21□□□□□ -0.61
TTC28-201ENST00000397906 GNALP38405 381 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 ARFIP1P53367 373 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 EOGTQ5NDL2 527 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 GCNT6Q5T4J0 391 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 CXXC5Q7LFL8 322 aaKnown RBP11.21□□□□□ -0.61
TTC28-201ENST00000397906 DEPDC4Q8N2C3 294 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 GPC6Q9Y625 555 aaPredicted RBP11.21□□□□□ -0.61
TTC28-201ENST00000397906 VPS26BQ4G0F5 336 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 ATRNL1Q5VV63 1379 aa11.21□□□□□ -0.61
TTC28-201ENST00000397906 ZNF433Q8N7K0 673 aaPredicted RBP11.21□□□□□ -0.61
TTC28-201ENST00000397906 MC1RQ01726 317 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 ABHD13Q7L211 337 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 BHLHE41Q9C0J9 482 aaPredicted RBP11.21□□□□□ -0.62
TTC28-201ENST00000397906 SPATA6Q9NWH7 488 aaPredicted RBP11.21□□□□□ -0.62
TTC28-201ENST00000397906 PLAGL1Q9UM63 463 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 DMTF1Q9Y222 760 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 TRIM38O00635 465 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 TRAPPC6AO75865 159 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 L1CAMP32004 1257 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 CLCQ05315 142 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 SNAPC1Q16533 368 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 PIK3R6Q5UE93 754 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 KBTBD2Q8IY47 623 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 BADQ92934 168 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 RASSF1Q9NS23 344 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 RCOR3Q9P2K3 495 aaPredicted RBP11.21□□□□□ -0.62
TTC28-201ENST00000397906 RGS17Q9UGC6 210 aaPredicted RBP11.21□□□□□ -0.62
TTC28-201ENST00000397906 DHRS12A0PJE2 317 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 HCRTO43612 131 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 PSIP1O75475 530 aaKnown RBP11.21□□□□□ -0.62
TTC28-201ENST00000397906 OR4F21O95013 312 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 PGM3O95394 542 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 C2P06681 752 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 ABHD2P08910 425 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 PPP2R2BQ00005 443 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 CRYBG2Q8N1P7 616 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 BRSK1Q8TDC3 778 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 DLG3Q92796 817 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 KLHL31Q9H511 634 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 CHMP1AQ9HD42 196 aaPredicted RBP11.21□□□□□ -0.62
TTC28-201ENST00000397906 TDP1Q9NUW8 608 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 FAM86C2PA6NEL3 165 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 STX16-NPEPL1H3BU86 382 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 STX16O14662 325 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 ASLP04424 464 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 MTX3Q5HYI7 312 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms