RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 PHACTR4Q8IZ21 702 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 RBFAQ8N0V3 343 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 ELMOD1Q8N336 334 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 OR2T11Q8NH01 316 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 LKAAEAR1Q8TD35 194 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 SORCS1Q8WY21 1168 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 SPATA17Q96L03 361 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 TRIM54Q9BYV2 358 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 ATP13A3Q9H7F0 1226 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 SLCO3A1Q9UIG8 710 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 PCTPQ9UKL6 214 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 NOL3O60936 208 aaKnown RBP10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 ESR1P03372 595 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 EPB42P16452 691 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 NR4A1P22736 598 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 DGKAP23743 735 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 CD70P32970 193 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 IST1P53990 364 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 CBX2Q14781 532 aaPredicted RBP10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 RFTN2Q52LD8 501 aaPredicted RBP10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 FAM26DQ5JW98 314 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 CACHD1Q5VU97 1274 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 CYP20A1Q6UW02 462 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 EFL1Q7Z2Z2 1120 aaKnown RBP10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 KRTCAP2Q8N6L1 136 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 BEND7Q8N7W2 519 aaPredicted RBP10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 ZNF296Q8WUU4 475 aaPredicted RBP10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 PLD4Q96BZ4 506 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 BIRC8Q96P09 236 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 EBPLQ9BY08 206 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 MRGBPQ9NV56 204 aa10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 MAGED1Q9Y5V3 778 aaPredicted RBP10.29□□□□□ -0.76
CPSF1P1-201ENST00000397477 ABCB1P08183 1280 aaPredicted RBP10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 OR4D2P58180 307 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 LAPTM4AQ15012 233 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 TTLL9Q3SXZ7 439 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 NANOGP8Q6NSW7 305 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 LIX1Q8N485 282 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 SCAMP4Q969E2 229 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 PLEKHG4BQ96PX9 1271 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 CHID1Q9BWS9 393 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 NANOGQ9H9S0 305 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 GNPTGQ9UJJ9 305 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 INVSQ9Y283 1065 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 HEMK1Q9Y5R4 338 aaPredicted RBP10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 PRSS51A0A1B0GVH4 220 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 LOC730098B7Z3J9 87 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 PTGES3LE9PB15 166 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 NOBOXO60393 691 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 FOXD2O60548 495 aaPredicted RBP10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 WDR47O94967 919 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 FKBP9O95302 570 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 NTRK1P04629 796 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 FESP07332 822 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 ATXN8OSP0DMR3 200 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 CST5P28325 142 aaPredicted RBP10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 VAC14Q08AM6 782 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 AASDHQ4L235 1098 aaPredicted RBP10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 CMPK2Q5EBM0 449 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 CWF19L1Q69YN2 538 aaKnown RBP10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 TXNDC11Q6PKC3 985 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 CYHR1Q6ZMK1 362 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 Q6ZVU0 165 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 FKBP9P1Q75LS8 142 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 STK40Q8N2I9 435 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 GALNT15Q8N3T1 639 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 DHRSXQ8N5I4 330 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 C2orf73Q8N5S3 287 aaPredicted RBP10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 RIN3Q8TB24 985 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 ING5Q8WYH8 240 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 APOLD1Q96LR9 279 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 COPS8Q99627 209 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 ZNF334Q9HCZ1 680 aaPredicted RBP10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 MTRRQ9UBK8 725 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 BAG5Q9UL15 447 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 PNMA8BQ9ULN7 279 aaPredicted RBP10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 VPS4AQ9UN37 437 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 A0A1W2PP18 115 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 TRIM24O15164 1050 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 HTRA2O43464 458 aaPredicted RBP10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 OTCP00480 354 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 RPIAP49247 311 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 ERVK-8P63133 956 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 SMARCB1Q12824 385 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 MRPL58Q14197 206 aaKnown RBP10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 RFTN1Q14699 578 aaPredicted RBP10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 MYLK3Q32MK0 819 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 UGT3A2Q3SY77 523 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 SYTL3Q4VX76 610 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 KANK2Q63ZY3 851 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 LHX8Q68G74 356 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 CXorf57Q6NSI4 855 aaKnown RBP10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 SPESP1Q6UW49 350 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 CMTR2Q8IYT2 770 aaKnown RBP10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 SFRP1Q8N474 314 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 RNF175Q8N4F7 328 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 ZBTB2Q8N680 514 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 RHEBL1Q8TAI7 183 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 ROPN1LQ96C74 230 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 OR52E6Q96RD3 313 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms