RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 GALNT16Q8N428 558 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.22□□□□□ -1.09
SCFD1-202ENST00000396629 TM9SF4Q92544 642 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 CLIP3Q96DZ5 547 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 TSGA13Q96PP4 275 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 DPH2Q9BQC3 489 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-202ENST00000396629 DHRS4Q9BTZ2 278 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 ZFYVE1Q9HBF4 777 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 SYTL2Q9HCH5 934 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 PCDH18Q9HCL0 1135 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 HRASLS2Q9NWW9 162 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 COPG2Q9UBF2 871 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 TMPRSS11EQ9UL52 423 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 SETD2Q9BYW2 2564 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-202ENST00000396629 A0A1B0GUH1 482 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 MTX2O75431 263 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 KLF7O75840 302 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-202ENST00000396629 HLA-DQB2P05538 268 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 MSL3P1P0C860 447 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 RARAP10276 462 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 TCF4P15884 667 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 CCNCP24863 283 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 KPNA2P52292 529 aaKnown RBP8.22□□□□□ -1.09
SCFD1-202ENST00000396629 ADCY2Q08462 1091 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 TMEM115Q12893 351 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-202ENST00000396629 CT47A1Q5JQC4 288 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-202ENST00000396629 DCAF10Q5QP82 559 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 FKBP15Q5T1M5 1219 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 ZNF385CQ66K41 422 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-202ENST00000396629 HGSNATQ68CP4 663 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 TIGD7Q6NT04 549 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-202ENST00000396629 GDF7Q7Z4P5 450 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 OOSP2Q86WS3 158 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 CLEC1AQ8NC01 280 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 NEK11Q8NG66 645 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 OR1L3Q8NH93 324 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 TEKT4Q8WW24 435 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 HSPH1Q92598 858 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 VPS35Q96QK1 796 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 XPO4Q9C0E2 1151 aaKnown RBP8.22□□□□□ -1.09
SCFD1-202ENST00000396629 ACTR5Q9H9F9 607 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-202ENST00000396629 FANCEQ9HB96 536 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 ZBTB20Q9HC78 741 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-202ENST00000396629 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.22□□□□□ -1.09
SCFD1-202ENST00000396629 RYDENQ9NUL5 291 aaKnown RBP8.22□□□□□ -1.09
SCFD1-202ENST00000396629 HAUS2Q9NVX0 235 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 KLF2Q9Y5W3 355 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-202ENST00000396629 TMCO5BA8MYB1 307 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 MFSD11O43934 449 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 LCA5LO95447 670 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 FERP16591 822 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 OTX2P32243 289 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 PAFAH1B3Q15102 231 aaKnown RBP8.21□□□□□ -1.1
SCFD1-202ENST00000396629 IFI16Q16666 785 aaKnown RBP8.21□□□□□ -1.1
SCFD1-202ENST00000396629 CDKAL1Q5VV42 579 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 TXNRD3NBQ6F5E7 133 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 FBXO38Q6PIJ6 1188 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 IRF2BP2Q7Z5L9 587 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 FAM71BQ8TC56 605 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 ZFPM2Q8WW38 1151 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 RELTQ969Z4 430 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 PPM1MQ96MI6 270 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 TRIB3Q96RU7 358 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 WDR77Q9BQA1 342 aaPredicted RBP8.21□□□□□ -1.1
SCFD1-202ENST00000396629 ADGRE3Q9BY15 652 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 MAGEE1Q9HCI5 957 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 PADI2Q9Y2J8 665 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 CSMD2Q7Z408 3487 aa8.21□□□□□ -1.1
SCFD1-202ENST00000396629 C9J4A7 227 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 CCDC172P0C7W6 258 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 MTHFD1P11586 935 aaKnown RBP8.2□□□□□ -1.1
SCFD1-202ENST00000396629 BPIP17213 487 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 CD86P42081 329 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 TSFMP43897 325 aaKnown RBP8.2□□□□□ -1.1
SCFD1-202ENST00000396629 BECN1Q14457 450 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 TESK1Q15569 626 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 PTCHD3Q3KNS1 767 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 IGFL2Q6UWQ7 119 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 FAM83HQ6ZRV2 1179 aaPredicted RBP8.2□□□□□ -1.1
SCFD1-202ENST00000396629 AMZ2Q86W34 360 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 TRAPPC5Q8IUR0 188 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 BRSK1Q8TDC3 778 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 GRHL3Q8TE85 626 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 PPP4R1Q8TF05 950 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 COG1Q8WTW3 980 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 FAR1Q8WVX9 515 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 AGAP3Q96P47 875 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 TLR10Q9BXR5 811 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 C1GALT1Q9NS00 363 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 SOHLH2Q9NX45 425 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 NOVA2Q9UNW9 492 aaKnown RBP8.2□□□□□ -1.1
SCFD1-202ENST00000396629 TTLL3Q9Y4R7 772 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 DNMT3AQ9Y6K1 912 aaPredicted RBP8.2□□□□□ -1.1
SCFD1-202ENST00000396629 MYO7BQ6PIF6 2116 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 NF1P21359 2839 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 ZFHX3Q15911 3703 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 OR6C74A6NCV1 312 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 SLC9B1P1A6NJY1 282 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 TMEM150CB9EJG8 249 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 PEX12O00623 359 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms