RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 PRMT9Q6P2P2 845 aa25.2■■□□□ 1.63
SMARCD3-203ENST00000392811 CYP2R1Q6VVX0 501 aa25.2■■□□□ 1.63
SMARCD3-203ENST00000392811 BTBD9Q96Q07 612 aa25.2■■□□□ 1.63
SMARCD3-203ENST00000392811 SPATS2LQ9NUQ6 558 aaKnown RBP25.2■■□□□ 1.63
SMARCD3-203ENST00000392811 INSL6Q9Y581 213 aa25.2■■□□□ 1.63
SMARCD3-203ENST00000392811 LAMA2P24043 3122 aaKnown RBP25.2■■□□□ 1.63
SMARCD3-203ENST00000392811 POP4O95707 220 aaKnown RBP25.2■■□□□ 1.62
SMARCD3-203ENST00000392811 LINGO3P0C6S8 592 aa25.2■■□□□ 1.62
SMARCD3-203ENST00000392811 PABPC1P11940 636 aaKnown RBP25.2■■□□□ 1.62
SMARCD3-203ENST00000392811 UFM1P61960 85 aa25.2■■□□□ 1.62
SMARCD3-203ENST00000392811 MED21Q13503 144 aa25.2■■□□□ 1.62
SMARCD3-203ENST00000392811 RCAN2Q14206 197 aa25.2■■□□□ 1.62
SMARCD3-203ENST00000392811 CAPRIN1Q14444 709 aaKnown RBP25.2■■□□□ 1.62
SMARCD3-203ENST00000392811 TICAM1Q8IUC6 712 aa25.2■■□□□ 1.62
SMARCD3-203ENST00000392811 MRPL43Q8N983 215 aaKnown RBP25.2■■□□□ 1.62
SMARCD3-203ENST00000392811 TMEM102Q8N9M5 508 aaPredicted RBP25.2■■□□□ 1.62
SMARCD3-203ENST00000392811 ADCY4Q8NFM4 1077 aa25.2■■□□□ 1.62
SMARCD3-203ENST00000392811 TSPEARQ8WU66 669 aa25.2■■□□□ 1.62
SMARCD3-203ENST00000392811 CEP44Q9C0F1 390 aa25.2■■□□□ 1.62
SMARCD3-203ENST00000392811 IPPKQ9H8X2 491 aa25.2■■□□□ 1.62
SMARCD3-203ENST00000392811 GID8Q9NWU2 228 aa25.2■■□□□ 1.62
SMARCD3-203ENST00000392811 AP4S1Q9Y587 144 aa25.2■■□□□ 1.62
SMARCD3-203ENST00000392811 A0A1W2PP18 115 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 TCRBV3S1A0A5B6 114 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 KATNA1O75449 491 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 KCNK10P57789 538 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 ATP13A5Q4VNC0 1218 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 ATP6AP1LQ52LC2 224 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 PDCD4Q53EL6 469 aaKnown RBP25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 OR52E8Q6IFG1 317 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 Q6ZVU0 165 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 SLC15A3Q8IY34 581 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 ZNF784Q8NCA9 323 aaPredicted RBP25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 CHST14Q8NCH0 376 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 VPS33AQ96AX1 596 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 LRRC58Q96CX6 371 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 EGFL8Q99944 293 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 ABCG8Q9H221 673 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 ZDHHC3Q9NYG2 299 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 PIKFYVEQ9Y2I7 2098 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 ASPDHA6ND91 283 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 SYNCRIPO60506 623 aaKnown RBP25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 SLC22A3O75751 556 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 OTCP00480 354 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 NSG1P42857 185 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 TRAF3Q13114 568 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 LRRC73Q5JTD7 316 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 IL27RAQ6UWB1 636 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 SFRP1Q8N474 314 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 FNDC5Q8NAU1 212 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 CATSPER1Q8NEC5 780 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 IRF7Q92985 503 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 ZNF641Q96N77 438 aaPredicted RBP25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 LINC00597Q9H2U6 94 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 BRD9Q9H8M2 597 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 TDP1Q9NUW8 608 aa25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 GEMIN8Q9NWZ8 242 aaKnown RBP25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 CXXC1Q9P0U4 656 aaPredicted RBP25.19■■□□□ 1.62
SMARCD3-203ENST00000392811 PLXNB3Q9ULL4 1909 aa25.18■■□□□ 1.62
SMARCD3-203ENST00000392811 MTCL1Q9Y4B5 1905 aaKnown RBP25.18■■□□□ 1.62
SMARCD3-203ENST00000392811 CAPNS1P04632 268 aa25.18■■□□□ 1.62
SMARCD3-203ENST00000392811 DDX6P26196 483 aaKnown RBP eCLIP25.18■■□□□ 1.62
SMARCD3-203ENST00000392811 YBX1P67809 324 aaKnown RBP25.18■■□□□ 1.62
SMARCD3-203ENST00000392811 FOLH1Q04609 750 aa25.18■■□□□ 1.62
SMARCD3-203ENST00000392811 SLC5A9Q2M3M2 681 aa25.18■■□□□ 1.62
SMARCD3-203ENST00000392811 DHFR2Q86XF0 187 aa25.18■■□□□ 1.62
SMARCD3-203ENST00000392811 SLCO4A1Q96BD0 722 aa25.18■■□□□ 1.62
SMARCD3-203ENST00000392811 HBEGFQ99075 208 aa25.18■■□□□ 1.62
SMARCD3-203ENST00000392811 TMEM79Q9BSE2 394 aa25.18■■□□□ 1.62
SMARCD3-203ENST00000392811 CMTM6Q9NX76 183 aa25.18■■□□□ 1.62
SMARCD3-203ENST00000392811 FGBP02675 491 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 C1SP09871 688 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 ZCCHC18P0CG32 403 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 HSPA8P11142 646 aaKnown RBP25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 TYRP14679 529 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 PTPN2P17706 415 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 SLC6A2P23975 617 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 B4GALNT1Q00973 533 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 TTLL9Q3SXZ7 439 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 FBXL19Q6PCT2 694 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 MYLIPQ8WY64 445 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 PBXIP1Q96AQ6 731 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 DUS3LQ96G46 650 aaKnown RBP25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 COPS8Q99627 209 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 LATS2Q9NRM7 1088 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 B4GALT6Q9UBX8 382 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 TXNDC9O14530 226 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 FGF19O95750 216 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 RHOP08100 348 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 GDF5P43026 501 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 FOXM1Q08050 763 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 ARHGAP15Q53QZ3 475 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 MILR1Q7Z6M3 343 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 RHBDF1Q96CC6 855 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 CD244Q9BZW8 370 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 SPHK2Q9NRA0 654 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 KCTD5Q9NXV2 234 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 WWOXQ9NZC7 414 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 ZIM2Q9NZV7 527 aa25.17■■□□□ 1.62
SMARCD3-203ENST00000392811 POLR2JP52435 117 aaKnown RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms