RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 KRT18P05783 430 aaKnown RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 FOLR2P14207 255 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 FDPSP14324 419 aaKnown RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 COX7A2P14406 83 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 IL7RP16871 459 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 BCL3P20749 454 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 PRKACGP22612 351 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 PIK3R1P27986 724 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 OXTRP30559 389 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 HOXC9P31274 260 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 PGM1P36871 562 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 PSMC4P43686 418 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 GABRB2P47870 512 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 ZFP36L2P47974 494 aaKnown RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 MMP15P51511 669 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 THOP1P52888 689 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 PAX9P55771 341 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 TMEM50BP56557 158 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 LYZP61626 148 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 UFM1P61960 85 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 HNRNPKP61978 463 aaKnown RBP eCLIP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 RPS18P62269 152 aaKnown RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 LGALS3BPQ08380 585 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 CD300CQ08708 224 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 PRKAA1Q13131 559 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 CALCOCO2Q13137 446 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 GPR17Q13304 367 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 DCTN2Q13561 401 aaKnown RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 SLC12A1Q13621 1099 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 BLMHQ13867 455 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 TRIM14Q14142 442 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 FGFBP1Q14512 234 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 POSTNQ15063 836 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 TAF5Q15542 800 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 ADCK5Q3MIX3 580 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 MOGAT2Q3SYC2 334 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 WDR45BQ5MNZ6 344 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 DCAF10Q5QP82 559 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 C6orf141Q5SZD1 244 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 NSUN5P2Q63ZY6 315 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 C1orf228Q6PIY5 440 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 FIP1L1Q6UN15 594 aaKnown RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 NHLRC1Q6VVB1 395 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 Q6ZRP5 223 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 DENND5BQ6ZUT9 1274 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 ATG9AQ7Z3C6 839 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 ZNF554Q86TJ5 538 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 ADCK1Q86TW2 530 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 SLC25A42Q86VD7 318 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 PIGZQ86VD9 579 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 SLC47A2Q86VL8 602 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 ZNF354CQ86Y25 554 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 MYLK4Q86YV6 388 aaPredicted RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 PM20D2Q8IYS1 436 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 ABHD12Q8N2K0 398 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 RASGEF1CQ8N431 466 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 C1orf52Q8N6N3 182 aaKnown RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 CCDC185Q8N715 623 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 NIPA2Q8N8Q9 360 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 USP38Q8NB14 1042 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 SUMF1Q8NBK3 374 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 NUP37Q8NFH4 326 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 OR1J2Q8NGS2 313 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 OR1J1Q8NGS3 322 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 RHOXF1Q8NHV9 184 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 KCNG4Q8TDN1 519 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 SMPDL3BQ92485 455 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 HSD17B8Q92506 261 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 IGSF8Q969P0 613 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 AZIN2Q96A70 460 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 GCC1Q96CN9 775 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 SLC45A3Q96JT2 553 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 SERAC1Q96JX3 654 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 PPP1R13BQ96KQ4 1090 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 B3GALT6Q96L58 329 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 PRICKLE1Q96MT3 831 aaPredicted RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 AGAP4Q96P64 663 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 MYADMQ96S97 322 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 KRT12Q99456 494 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 LBHD1Q9BQE6 289 aaPredicted RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 ZNF577Q9BSK1 485 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 PHF7Q9BWX1 381 aaPredicted RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 WWTR1Q9GZV5 400 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 INTS2Q9H0H0 1204 aaKnown RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 SLITRK2Q9H156 845 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 SIL1Q9H173 461 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 ATP13A3Q9H7F0 1226 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 HEXA-AS1Q9H8Q6 139 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 KIF9Q9HAQ2 790 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 ACKR4Q9NPB9 350 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 LTB4R2Q9NPC1 389 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 OLFML3Q9NRN5 406 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 TEX10Q9NXF1 929 aaPredicted RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 ANAPC11Q9NYG5 84 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 FLRT3Q9NZU0 649 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 COPG2Q9UBF2 871 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 CTSZQ9UBR2 303 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 STK39Q9UEW8 545 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 FBXL17Q9UF56 701 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 CNOT7Q9UIV1 285 aaKnown RBP0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms