RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 PROZP22891 400 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 RPIAP49247 311 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 DIO3P55073 304 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 TPTEP56180 551 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 SREBF2Q12772 1141 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 PDCD4Q53EL6 469 aaKnown RBP16.6■□□□□ 0.25
VARS-215ENST00000375663 ZNF678Q5SXM1 525 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 CPTPQ5TA50 214 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 ZNF513Q8N8E2 541 aaPredicted RBP16.6■□□□□ 0.25
VARS-215ENST00000375663 Q96MT0 163 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 MRPL9Q9BYD2 267 aaKnown RBP16.6■□□□□ 0.25
VARS-215ENST00000375663 ZCCHC2Q9C0B9 1178 aaKnown RBP16.6■□□□□ 0.25
VARS-215ENST00000375663 RAB23Q9ULC3 237 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 ANGPT4Q9Y264 503 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 TMA7Q9Y2S6 64 aaKnown RBP16.6■□□□□ 0.25
VARS-215ENST00000375663 ASB3Q9Y575 518 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 KCNE2Q9Y6J6 123 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 SAGE2PA6NJ88 616 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 G3V2L1 256 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 SGTAO43765 313 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 NBNO60934 754 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 PRKD3O94806 890 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 GSTM5P46439 218 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 RFX3P48380 749 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 TRIM40Q6P9F5 258 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 RNF19BQ6ZMZ0 732 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 TRAPPC5Q8IUR0 188 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 CHCHD6Q9BRQ6 235 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 C1orf109Q9NX04 203 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 KCTD5Q9NXV2 234 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 ZIM2Q9NZV7 527 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 TAF1P21675 1872 aa16.6■□□□□ 0.25
VARS-215ENST00000375663 IGKV6D-21A0A0A0MT36 114 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 ANKDD1BA6NHY2 528 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 FPGTO14772 594 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 SERPINI2O75830 405 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 TBX18O95935 607 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 GRK3P35626 688 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 GGT5P36269 586 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 HMGCS1Q01581 520 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 ACOX1Q15067 660 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 MOGQ16653 247 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 PTCHD4Q6ZW05 846 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 SMYD1Q8NB12 490 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 SLC45A3Q96JT2 553 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 C20orf27Q9GZN8 174 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.59■□□□□ 0.25
VARS-215ENST00000375663 ZDHHC7Q9NXF8 308 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 EDN1P05305 212 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 CYP2A6P11509 494 aaPredicted RBP16.59■□□□□ 0.25
VARS-215ENST00000375663 IL4RP24394 825 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 TECRLQ5HYJ1 363 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 ZBTB2Q8N680 514 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 HJURPQ8NCD3 748 aaPredicted RBP16.59■□□□□ 0.25
VARS-215ENST00000375663 TRIM8Q9BZR9 551 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 CCM2LQ9NUG4 571 aaPredicted RBP16.59■□□□□ 0.25
VARS-215ENST00000375663 IGKV6-21A0A0C4DH24 114 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 GLYATL1P3A0A0U1RQE8 302 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 A0A1B0GVG6 124 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 PIRO00625 290 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 OR10H3O60404 316 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 ACSL4O60488 711 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 PAICSP22234 425 aaKnown RBP16.59■□□□□ 0.25
VARS-215ENST00000375663 FMO3P31513 532 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 RPS14P62263 151 aaKnown RBP16.59■□□□□ 0.25
VARS-215ENST00000375663 FAM110CQ1W6H9 321 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 TAPT1Q6NXT6 567 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 OSGEPL1Q9H4B0 414 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 SERHL2Q9H4I8 314 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 SOX17Q9H6I2 414 aaPredicted RBP16.59■□□□□ 0.25
VARS-215ENST00000375663 CRTAC1Q9NQ79 661 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 SERHLQ9NQF3 203 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 TOR4AQ9NXH8 423 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 CITO14578 2027 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 PRORSD1PA6NEY8 169 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 CCDC182A6NF36 153 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 KPNA3O00505 521 aaPredicted RBP16.59■□□□□ 0.25
VARS-215ENST00000375663 ENPP3O14638 875 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 PGLSO95336 258 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 MAGEA6P43360 314 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 ANXA8L1Q5VT79 327 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 DEFB128Q7Z7B8 93 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 ZNF614Q8N883 585 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 PRICKLE1Q96MT3 831 aaPredicted RBP16.59■□□□□ 0.25
VARS-215ENST00000375663 OLFM1Q99784 485 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 ATG10Q9H0Y0 220 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 CRISPLD1Q9H336 500 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 TRIM39Q9HCM9 518 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 PLCH1Q4KWH8 1693 aa16.59■□□□□ 0.25
VARS-215ENST00000375663 ZCWPW2A0A1B0GU75 182 aa16.58■□□□□ 0.25
VARS-215ENST00000375663 IQCF5A8MTL0 148 aa16.58■□□□□ 0.25
VARS-215ENST00000375663 TBX1O43435 398 aa16.58■□□□□ 0.25
VARS-215ENST00000375663 IL7RP16871 459 aa16.58■□□□□ 0.25
VARS-215ENST00000375663 TAF1AQ15573 450 aaPredicted RBP16.58■□□□□ 0.25
VARS-215ENST00000375663 TAB1Q15750 504 aa16.58■□□□□ 0.25
VARS-215ENST00000375663 PPP4R4Q6NUP7 873 aa16.58■□□□□ 0.25
VARS-215ENST00000375663 ERAP2Q6P179 960 aa16.58■□□□□ 0.25
VARS-215ENST00000375663 OR52J3Q8NH60 311 aa16.58■□□□□ 0.25
VARS-215ENST00000375663 CLP1Q92989 425 aaKnown RBP16.58■□□□□ 0.25
VARS-215ENST00000375663 AARSD1Q9BTE6 412 aaKnown RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms