RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 ERAP2Q6P179 960 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 SPAG17Q6Q759 2223 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 RTL10Q7L3V2 364 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 RBM23Q86U06 439 aaKnown RBP4.59□□□□□ -1.67
PMS1-202ENST00000374826 C12orf56Q8IXR9 622 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 VPS52Q8N1B4 723 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 GUF1Q8N442 669 aaKnown RBP4.59□□□□□ -1.67
PMS1-202ENST00000374826 XXYLT1Q8NBI6 393 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 SPATA20Q8TB22 786 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 CLEC4CQ8WTT0 213 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 RSC1A1Q92681 617 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 CCDC127Q96BQ5 260 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 EEF2KMTQ96G04 330 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 ZNF479Q96JC4 524 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 GSDMAQ96QA5 445 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 HERC2P3Q9BVR0 1158 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 SORBS1Q9BX66 1292 aaKnown RBP4.59□□□□□ -1.67
PMS1-202ENST00000374826 MTMR12Q9C0I1 747 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 LMAN2LQ9H0V9 348 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 MAP6D1Q9H9H5 199 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 OBP2BQ9NPH6 170 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 TXLNGQ9NUQ3 528 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 SLC38A7Q9NVC3 462 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 ADAM28Q9UKQ2 775 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 UBQLN1Q9UMX0 589 aaKnown RBP4.59□□□□□ -1.67
PMS1-202ENST00000374826 F5P12259 2224 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 RALGAPA1Q6GYQ0 2036 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 DOCK4Q8N1I0 1966 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 CEP192Q8TEP8 1941 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 SF3B1O75533 1304 aaKnown RBP eCLIP4.58□□□□□ -1.68
PMS1-202ENST00000374826 MBD3L5A6NJ08 208 aaPredicted RBP4.58□□□□□ -1.68
PMS1-202ENST00000374826 ZNF233A6NK53 670 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 LGALS16A8MUM7 142 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 TMEM189-UBE2V1I3L0A0 370 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 PDXKO00764 312 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 PSMA7O14818 248 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 TNFRSF13BO14836 293 aaPredicted RBP4.58□□□□□ -1.68
PMS1-202ENST00000374826 CALUO43852 315 aaPredicted RBP4.58□□□□□ -1.68
PMS1-202ENST00000374826 TBX10O75333 385 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 TADA2AO75478 443 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 LDHAP00338 332 aaKnown RBP4.58□□□□□ -1.68
PMS1-202ENST00000374826 NGFRP08138 427 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 KRT19P08727 400 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 TRIM49P0CI25 452 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 TRIM49CP0CI26 452 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 TNNI1P19237 187 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 NR2F2P24468 414 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 ARRB2P32121 409 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 GLUD2P49448 558 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 STX17P56962 302 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 BFSP1Q12934 665 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 PTK2BQ14289 1009 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 SMC1AQ14683 1233 aaKnown RBP4.58□□□□□ -1.68
PMS1-202ENST00000374826 PTPN14Q15678 1187 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 DPCR1Q3MIW9 517 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 MAP9Q49MG5 647 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 ZCWPW2Q504Y3 356 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 ALG10Q5BKT4 473 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 ALG10BQ5I7T1 473 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 ENTPD8Q5MY95 495 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 FAM171A1Q5VUB5 890 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 SPATA1Q5VX52 437 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 PRSS55Q6UWB4 352 aaPredicted RBP4.58□□□□□ -1.68
PMS1-202ENST00000374826 PARM1Q6UWI2 310 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 CD300LGQ6UXG3 332 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 KDELC2Q7Z4H8 507 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 CEP57Q86XR8 500 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 GPSM1Q86YR5 675 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 CD302Q8IX05 232 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 RNF168Q8IYW5 571 aaPredicted RBP4.58□□□□□ -1.68
PMS1-202ENST00000374826 ADSSL1Q8N142 457 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 ZNF527Q8NB42 609 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 BEST2Q8NFU1 509 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 VN1R2Q8NFZ6 395 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 OR5B17Q8NGF7 314 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 GOLGA5Q8TBA6 731 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 NELFBQ8WX92 580 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 INPP5DQ92835 1189 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 ZNF419Q96HQ0 510 aaPredicted RBP4.58□□□□□ -1.68
PMS1-202ENST00000374826 TSG101Q99816 390 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 TLE6Q9H808 572 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 PLEKHA5Q9HAU0 1116 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 LIN7CQ9NUP9 197 aaKnown RBP4.58□□□□□ -1.68
PMS1-202ENST00000374826 DPP3Q9NY33 737 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 CGNQ9P2M7 1197 aaKnown RBP4.58□□□□□ -1.68
PMS1-202ENST00000374826 FBXO4Q9UKT5 387 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 BARX2Q9UMQ3 279 aaPredicted RBP4.58□□□□□ -1.68
PMS1-202ENST00000374826 TRAF3IP3Q9Y228 551 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 LZTS1Q9Y250 596 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 C2CD2Q9Y426 696 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 SPTBN5Q9NRC6 3674 aaKnown RBP4.58□□□□□ -1.68
PMS1-202ENST00000374826 TECTAO75443 2155 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 SHROOM3Q8TF72 1996 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 KMT2EQ8IZD2 1858 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 COL4A2P08572 1712 aa4.58□□□□□ -1.68
PMS1-202ENST00000374826 ZDBF2Q9HCK1 2354 aa4.57□□□□□ -1.68
PMS1-202ENST00000374826 TP53BP1Q12888 1972 aaPredicted RBP4.57□□□□□ -1.68
PMS1-202ENST00000374826 BDP1A6H8Y1 2624 aa4.57□□□□□ -1.68
PMS1-202ENST00000374826 ANKRD36A6QL64 1941 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms