RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 RBM12BQ8IXT5 1001 aaKnown RBP13.52□□□□□ -0.25
SSR4-202ENST00000370085 CFAP206Q8IYR0 622 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 CLDN19Q8N6F1 224 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 IFI44Q8TCB0 444 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 IFT81Q8WYA0 676 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 CDKL2Q92772 493 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 CXorf40BQ96DE9 158 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 CERS2Q96G23 380 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.52□□□□□ -0.25
SSR4-202ENST00000370085 NSMCE4AQ9NXX6 385 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 MARCH4Q9P2E8 410 aaPredicted RBP13.52□□□□□ -0.25
SSR4-202ENST00000370085 LRIT1Q9P2V4 623 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 SLC23A2Q9UGH3 650 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 PCYT1BQ9Y5K3 369 aaPredicted RBP13.52□□□□□ -0.25
SSR4-202ENST00000370085 HEBP2Q9Y5Z4 205 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 COMMD10Q9Y6G5 202 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 ESYT3A0FGR9 886 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 E5RI56 91 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 TP73O15350 636 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 NOBOXO60393 691 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 OR1I1O60431 355 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 SPAG6O75602 509 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 VIPP01282 170 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 RPL10P27635 214 aaKnown RBP13.51□□□□□ -0.25
SSR4-202ENST00000370085 GPR3P46089 330 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 EIF3BP55884 814 aaKnown RBP13.51□□□□□ -0.25
SSR4-202ENST00000370085 NFE2L1Q14494 772 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 SEMA3AQ14563 771 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 SEPT7Q16181 437 aaKnown RBP13.51□□□□□ -0.25
SSR4-202ENST00000370085 STEAP4Q687X5 459 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 IYDQ6PHW0 289 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 ABRAXAS1Q6UWZ7 409 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 ERMP1Q7Z2K6 904 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 LDB1Q86U70 411 aaPredicted RBP13.51□□□□□ -0.25
SSR4-202ENST00000370085 NAGSQ8N159 534 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 AGGF1Q8N302 714 aaeCLIP13.51□□□□□ -0.25
SSR4-202ENST00000370085 SFRP1Q8N474 314 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 ASZ1Q8WWH4 475 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 ELMO1Q92556 727 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 TMEM159Q96B96 161 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 PWWP2AQ96N64 755 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 FMO2Q99518 471 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 TRIM56Q9BRZ2 755 aaKnown RBP13.51□□□□□ -0.25
SSR4-202ENST00000370085 CAAP1Q9H8G2 361 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 SARS2Q9NP81 518 aaKnown RBP13.51□□□□□ -0.25
SSR4-202ENST00000370085 PRDM8Q9NQV8 689 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 IARS2Q9NSE4 1012 aaKnown RBP13.51□□□□□ -0.25
SSR4-202ENST00000370085 ZFATQ9P243 1243 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 FAM8A1Q9UBU6 413 aa13.51□□□□□ -0.25
SSR4-202ENST00000370085 DMGDHQ9UI17 866 aaKnown RBP13.51□□□□□ -0.25
SSR4-202ENST00000370085 SPTBN2O15020 2390 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 APOA4P06727 396 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 ERVK-10P10266 1014 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 NDUFS1P28331 727 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 FASLGP48023 281 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 PPM1FP49593 454 aaPredicted RBP13.5□□□□□ -0.25
SSR4-202ENST00000370085 HHEXQ03014 270 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 MGAT5Q09328 741 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 KRT33BQ14525 404 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 GUSBP11Q6P575 273 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 OTOAQ7RTW8 1153 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 C17orf82Q86X59 251 aaPredicted RBP13.5□□□□□ -0.25
SSR4-202ENST00000370085 IGDCC3Q8IVU1 814 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 GALNT15Q8N3T1 639 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 ARL14Q8N4G2 192 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 SLC37A2Q8TED4 501 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 LPGAT1Q92604 370 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 SLC38A3Q99624 504 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 COG4Q9H9E3 785 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 POT1Q9NUX5 634 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 IL1RAPL1Q9NZN1 696 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 TXNDC16Q9P2K2 825 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 FBXO5Q9UKT4 447 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 ST14Q9Y5Y6 855 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 COLEC10Q9Y6Z7 277 aa13.5□□□□□ -0.25
SSR4-202ENST00000370085 LY6G6EA0A0G2JKS1 128 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 A6NCN8 305 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 SGTAO43765 313 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 KDM1AO60341 852 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 RHOXF2BP0C7M4 288 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 XRCC1P18887 633 aaPredicted RBP13.49□□□□□ -0.25
SSR4-202ENST00000370085 CHRM3P20309 590 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 FMO4P31512 558 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 PHBP35232 272 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 SLC1A2P43004 574 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 MAGEA4P43358 317 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 CD151P48509 253 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 MAZP56270 477 aaKnown RBP13.49□□□□□ -0.25
SSR4-202ENST00000370085 CTBP1Q13363 440 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 BOP1Q14137 746 aaKnown RBP13.49□□□□□ -0.25
SSR4-202ENST00000370085 SMAD1Q15797 465 aaKnown RBP13.49□□□□□ -0.25
SSR4-202ENST00000370085 TTLL9Q3SXZ7 439 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 ZDHHC24Q6UX98 284 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 C3orf62Q6ZUJ4 267 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 GALNT7Q86SF2 657 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 CNTN4Q8IWV2 1026 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 C2CD4AQ8NCU7 369 aaPredicted RBP13.49□□□□□ -0.25
SSR4-202ENST00000370085 ADAMTS14Q8WXS8 1223 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 CCDC74AQ96AQ1 378 aa13.49□□□□□ -0.25
SSR4-202ENST00000370085 CCDC3Q9BQI4 270 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms