RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ARMC6Q6NXE6 501 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 ERAP2Q6P179 960 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 RAD9BQ6WBX8 426 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 TPGS1Q6ZTW0 290 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 MICALCLQ6ZW33 695 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 SLC26A9Q7LBE3 791 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 PHLDB2Q86SQ0 1253 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 UNC45BQ8IWX7 931 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 SYTL1Q8IYJ3 562 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 MCOLN2Q8IZK6 566 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 SLC25A43Q8WUT9 341 aaPredicted RBP7.92□□□□□ -1.14
YBX3-204ENST00000366290 GOLGA1Q92805 767 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 TMEM41AQ96HV5 264 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 SERPINB11Q96P15 392 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 POPDC2Q9HBU9 364 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 SEPT11Q9NVA2 429 aaKnown RBP7.92□□□□□ -1.14
YBX3-204ENST00000366290 DNAJC17Q9NVM6 304 aaKnown RBP7.92□□□□□ -1.14
YBX3-204ENST00000366290 ASPMQ8IZT6 3477 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 A0A087WV62 115 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 ANTXRLA6NF34 631 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 PRRT4C9JH25 899 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 F5H697 171 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 SGK1O00141 431 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 MSI1O43347 362 aaKnown RBP7.91□□□□□ -1.14
YBX3-204ENST00000366290 HSF2BPO75031 334 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 RTN2O75298 545 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 GRAP2O75791 330 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 RPP40O75818 363 aaKnown RBP7.91□□□□□ -1.14
YBX3-204ENST00000366290 LCA5LO95447 670 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 RETP07949 1114 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 RRM1P23921 792 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 HOXD9P28356 352 aaPredicted RBP7.91□□□□□ -1.14
YBX3-204ENST00000366290 NTSR1P30989 418 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 NSFP46459 744 aaKnown RBP7.91□□□□□ -1.14
YBX3-204ENST00000366290 KDSRQ06136 332 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 SIM2Q14190 667 aaPredicted RBP7.91□□□□□ -1.14
YBX3-204ENST00000366290 STARD3Q14849 445 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 MPPE1Q53F39 396 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 FAM133BQ5BKY9 247 aaKnown RBP7.91□□□□□ -1.14
YBX3-204ENST00000366290 EFHC1Q5JVL4 640 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 C10orf76Q5T2E6 689 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 SYPL2Q5VXT5 272 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 FCRL6Q6DN72 434 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 OR6B2Q6IFH4 312 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 PLEKHA7Q6IQ23 1121 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 ALKBH5Q6P6C2 394 aaKnown RBP7.91□□□□□ -1.14
YBX3-204ENST00000366290 GGNQ86UU5 652 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 ZDHHC17Q8IUH5 632 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 ALLCQ8N6M5 410 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.91□□□□□ -1.14
YBX3-204ENST00000366290 TSTD1Q8NFU3 115 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 JOSD2Q8TAC2 188 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 DQX1Q8TE96 717 aaKnown RBP7.91□□□□□ -1.14
YBX3-204ENST00000366290 IPO4Q8TEX9 1081 aaKnown RBP7.91□□□□□ -1.14
YBX3-204ENST00000366290 MYEOVQ96EZ4 313 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 VCPIP1Q96JH7 1222 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 PLEKHG4BQ96PX9 1271 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 GABRG3Q99928 467 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.91□□□□□ -1.14
YBX3-204ENST00000366290 PTDSS2Q9BVG9 487 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 UNKLQ9H9P5 680 aaKnown RBP7.91□□□□□ -1.14
YBX3-204ENST00000366290 TMEM51Q9NW97 253 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 ZNHIT6Q9NWK9 470 aaKnown RBP7.91□□□□□ -1.14
YBX3-204ENST00000366290 ADAM22Q9P0K1 906 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 DKK2Q9UBU2 259 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 NAALADL1Q9UQQ1 740 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 REXO2Q9Y3B8 237 aaKnown RBP7.91□□□□□ -1.14
YBX3-204ENST00000366290 MUC22E2RYF6 1773 aaPredicted RBP7.91□□□□□ -1.14
YBX3-204ENST00000366290 THADAQ6YHU6 1953 aa7.91□□□□□ -1.14
YBX3-204ENST00000366290 KNL1Q8NG31 2342 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 DOCK4Q8N1I0 1966 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 A0A1W2PQF6 199 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 KCNU1A8MYU2 1149 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 GOLGA8SH3BPF8 625 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 TIMM44O43615 452 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 DAB1O75553 588 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 KLF8O95600 359 aaPredicted RBP7.9□□□□□ -1.14
YBX3-204ENST00000366290 TRUB2O95900 331 aaKnown RBP7.9□□□□□ -1.14
YBX3-204ENST00000366290 CALB1P05937 261 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 HMBSP08397 361 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 C1SP09871 688 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 TPH1P17752 444 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 PTDSS1P48651 473 aaKnown RBP7.9□□□□□ -1.14
YBX3-204ENST00000366290 GALCP54803 685 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 GSDMDP57764 484 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 RPL7AP62424 266 aaKnown RBP7.9□□□□□ -1.14
YBX3-204ENST00000366290 CCZ1BP86790 482 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 CCZ1P86791 482 aaPredicted RBP7.9□□□□□ -1.14
YBX3-204ENST00000366290 OGDHQ02218 1023 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 MTA1Q13330 715 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 MAMLD1Q13495 774 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 TUBB3Q13509 450 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 E2F5Q15329 346 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 CCDC122Q5T0U0 273 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 RBM20Q5T481 1227 aaKnown RBP7.9□□□□□ -1.14
YBX3-204ENST00000366290 ARHGAP40Q5TG30 622 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 SP5Q6BEB4 398 aaPredicted RBP7.9□□□□□ -1.14
YBX3-204ENST00000366290 PLAG1Q6DJT9 500 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 ARCQ7LC44 396 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 BNIPLQ7Z465 357 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms