RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 NDNQ99608 321 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 OMDQ99983 421 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 NUF2Q9BZD4 464 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 PKD2L2Q9NZM6 624 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 PLXNA2O75051 1894 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 A0A087X1B8 175 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 GLYATL1P3A0A0U1RQE8 302 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 C1QTNF3-AMACRE9PGA6 284 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 PHGDHO43175 533 aaKnown RBP12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 DENRO43583 198 aaKnown RBP12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 SLC35E2BP0CK96 405 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 HNRNPLP14866 589 aaKnown RBP eCLIP12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 BPIP17213 487 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 ME2P23368 584 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 GSTT1P30711 240 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 PTSQ03393 145 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 RBM20Q5T481 1227 aaKnown RBP12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 HECTD2Q5U5R9 776 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 PSAPL1Q6NUJ1 521 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 PARS2Q7L3T8 475 aaKnown RBP12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 SNX20Q7Z614 316 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 ZNF513Q8N8E2 541 aaPredicted RBP12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 ASB8Q9H765 288 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 PCDH12Q9NPG4 1184 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 TRPV5Q9NQA5 729 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 PRSS16Q9NQE7 514 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 NCKIPSDQ9NZQ3 722 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 ZDHHC2Q9UIJ5 367 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 MTF2Q9Y483 593 aaPredicted RBP12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 STON1Q9Y6Q2 735 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 PIAS3Q9Y6X2 628 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 SMIM31A0A1B0GVY4 71 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 SPINT1O43278 529 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 EGFP01133 1207 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 PABPC4LP0CB38 370 aaKnown RBP12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 IL9P15248 144 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 ITGB7P26010 798 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 TIE1P35590 1138 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 GLRBP48167 497 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 DLG1Q12959 904 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 ENPP2Q13822 863 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 PON2Q15165 354 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 ZNF423Q2M1K9 1284 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 CNPY1Q3B7I2 92 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 GPR33Q49SQ1 333 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 PIGGQ5H8A4 983 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 LYPLAL1Q5VWZ2 237 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 FBXL19Q6PCT2 694 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 ADCY4Q8NFM4 1077 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 ARRDC3Q96B67 414 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 CCDC126Q96EE4 140 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 CCDC97Q96F63 343 aaPredicted RBP12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 FAR2Q96K12 515 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 MRPL57Q9BQC6 102 aaKnown RBP12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 MRPL46Q9H2W6 279 aaKnown RBP12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 ZNF385DQ9H6B1 395 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 C8orf33Q9H7E9 229 aaPredicted RBP12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 WDR41Q9HAD4 459 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 ZBTB26Q9HCK0 441 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 IL26Q9NPH9 171 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 PRDM6Q9NQX0 595 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 RAD18Q9NS91 495 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 RAB26Q9ULW5 256 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 G3BP2Q9UN86 482 aaKnown RBP12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 ITM2BQ9Y287 266 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 COMMD3-BMI1R4GMX3 469 aa12.99□□□□□ -0.33
SQSTM1-201ENST00000360718 TARM1B6A8C7 271 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 CFLARO15519 480 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 DLX3O60479 287 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 C1SP09871 688 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 SBK3P0C264 359 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 ENO3P13929 434 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 PTGER3P43115 390 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 HSPA13P48723 471 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 SUOXP51687 545 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 NFATC2Q13469 925 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 ZNF460Q14592 562 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 FAM46CQ5VWP2 391 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 SDE2Q6IQ49 451 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 PIWIL4Q7Z3Z4 852 aaKnown RBP12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 RALGPS2Q86X27 583 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 CEP97Q8IW35 865 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 MARVELD2Q8N4S9 558 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 CEP70Q8NHQ1 597 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 NCSTNQ92542 709 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 LPGAT1Q92604 370 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 DNASE1L2Q92874 299 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 RCN3Q96D15 328 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 DCUN1D1Q96GG9 259 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 PPP1R36Q96LQ0 422 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 CATSPER2Q96P56 530 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 PLEKHG4BQ96PX9 1271 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 CRLS1Q9UJA2 301 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 COMMD10Q9Y6G5 202 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 VCANP13611 3396 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 ANKRD12Q6UB98 2062 aa12.98□□□□□ -0.33
SQSTM1-201ENST00000360718 SYNCRIPO60506 623 aaKnown RBP12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 FMO4P31512 558 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 SPINT3P49223 89 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 DNAJB13P59910 316 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms