RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.83■□□□□ 0.12
PTPN11-201ENST00000351677 TMEM88BA6NKF7 163 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 FAM159BA6NKW6 160 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 MAGP20916 626 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 BLMHQ13867 455 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 DENND5AQ6IQ26 1287 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 MED27Q6P2C8 311 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 ST13P5Q8NFI4 369 aaPredicted RBP15.82■□□□□ 0.12
PTPN11-201ENST00000351677 INTS10Q9NVR2 710 aaKnown RBP15.82■□□□□ 0.12
PTPN11-201ENST00000351677 PCDHGA4Q9Y5G9 962 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 COL14A1Q05707 1796 aaKnown RBP15.82■□□□□ 0.12
PTPN11-201ENST00000351677 GTPBP1O00178 669 aaKnown RBP15.82■□□□□ 0.12
PTPN11-201ENST00000351677 MCFD2Q8NI22 146 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 ZNF317Q96PQ6 595 aaPredicted RBP15.82■□□□□ 0.12
PTPN11-201ENST00000351677 SEMA3GQ9NS98 782 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 MAP10Q9P2G4 905 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 SIX3O95343 332 aaPredicted RBP15.82■□□□□ 0.12
PTPN11-201ENST00000351677 NR2F6P10588 404 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 PAQR3Q6TCH7 311 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 C8orf4Q9NR00 106 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 CMTM6Q9NX76 183 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 SLC2A6Q9UGQ3 507 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 GABRDO14764 452 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 FGF19O95750 216 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 ADGRE1Q14246 886 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 SATL1Q86VE3 508 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 NAT14Q8WUY8 206 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 DDX1Q92499 740 aaKnown RBP15.82■□□□□ 0.12
PTPN11-201ENST00000351677 SMG7Q92540 1137 aaKnown RBP15.82■□□□□ 0.12
PTPN11-201ENST00000351677 SLC7A8Q9UHI5 535 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 TAF4O00268 1085 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 PER2O15055 1255 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 RNASEH2AO75792 299 aaKnown RBP15.82■□□□□ 0.12
PTPN11-201ENST00000351677 IL12AP29459 219 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 GALK1P51570 392 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 CDCA2Q69YH5 1023 aaPredicted RBP15.82■□□□□ 0.12
PTPN11-201ENST00000351677 FEM1CQ96JP0 617 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 OR52B2Q96RD2 323 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 TTLL2Q9BWV7 592 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 TLE6Q9H808 572 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 GKN1Q9NS71 199 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 TEX264Q9Y6I9 313 aa15.82■□□□□ 0.12
PTPN11-201ENST00000351677 ABHD14A-ACY1A0A1B0GW23 586 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 TMEM233B4DJY2 109 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 J3KR12 359 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 SCAMP1O15126 338 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 NIPSNAP2O75323 286 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 PRR23CQ6ZRP0 262 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 SLC43A3Q8NBI5 491 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 BRI3BPQ8WY22 251 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 LMAN2LQ9H0V9 348 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 TPK1Q9H3S4 243 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 PHPT1Q9NRX4 125 aaPredicted RBP15.81■□□□□ 0.12
PTPN11-201ENST00000351677 RGS10O43665 173 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 ANGPTL1O95841 491 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 CSKP41240 450 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 ELP6Q0PNE2 266 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 TRAP1Q12931 704 aaKnown RBP15.81■□□□□ 0.12
PTPN11-201ENST00000351677 CCNIQ14094 377 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 ADAMTS15Q8TE58 950 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 ABCB8Q9NUT2 735 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 CDH5P33151 784 aaPredicted RBP15.81■□□□□ 0.12
PTPN11-201ENST00000351677 MOSPD2Q8NHP6 518 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 PEBP4Q96S96 227 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 SUCOQ9UBS9 1254 aaKnown RBP15.81■□□□□ 0.12
PTPN11-201ENST00000351677 A0A1W2PQ67 120 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 HERVK_113P63132 956 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 RAPSNQ13702 412 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 SH3D19Q5HYK7 790 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 SIRPB2Q5JXA9 342 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 TMEM220Q6QAJ8 160 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 AHSA2Q719I0 299 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 OSTM1Q86WC4 334 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 ERVK-6Q9BXR3 956 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 SCLYQ96I15 445 aa15.81■□□□□ 0.12
PTPN11-201ENST00000351677 NRP1O14786 923 aa15.8■□□□□ 0.12
PTPN11-201ENST00000351677 MYL9P24844 172 aa15.8■□□□□ 0.12
PTPN11-201ENST00000351677 FBXL22Q6P050 247 aa15.8■□□□□ 0.12
PTPN11-201ENST00000351677 ZNF730Q6ZMV8 503 aa15.8■□□□□ 0.12
PTPN11-201ENST00000351677 BEND7Q8N7W2 519 aaPredicted RBP15.8■□□□□ 0.12
PTPN11-201ENST00000351677 FAM98AQ8NCA5 519 aaKnown RBP15.8■□□□□ 0.12
PTPN11-201ENST00000351677 FUBP3Q96I24 572 aaKnown RBP eCLIP15.8■□□□□ 0.124e-7■■■□□ 15.2
PTPN11-201ENST00000351677 BRINP2Q9C0B6 783 aa15.8■□□□□ 0.12
PTPN11-201ENST00000351677 CCDC177Q9NQR7 707 aaPredicted RBP15.8■□□□□ 0.12
PTPN11-201ENST00000351677 CXCR6O00574 342 aa15.8■□□□□ 0.12
PTPN11-201ENST00000351677 NOBOXO60393 691 aa15.8■□□□□ 0.12
PTPN11-201ENST00000351677 PRNPP04156 253 aa15.8■□□□□ 0.12
PTPN11-201ENST00000351677 MTHFD1P11586 935 aaKnown RBP15.8■□□□□ 0.12
PTPN11-201ENST00000351677 C1GALT1C1Q96EU7 318 aa15.8■□□□□ 0.12
PTPN11-201ENST00000351677 PTPN18Q99952 460 aa15.8■□□□□ 0.12
PTPN11-201ENST00000351677 HEPHQ9BQS7 1158 aa15.8■□□□□ 0.12
PTPN11-201ENST00000351677 EXD2Q9NVH0 621 aa15.8■□□□□ 0.12
PTPN11-201ENST00000351677 C1orf109Q9NX04 203 aa15.8■□□□□ 0.12
PTPN11-201ENST00000351677 IFT80Q9P2H3 777 aaPredicted RBP15.8■□□□□ 0.12
PTPN11-201ENST00000351677 SIX4Q9UIU6 781 aa15.8■□□□□ 0.12
PTPN11-201ENST00000351677 TESMINQ9Y4I5 508 aa15.8■□□□□ 0.12
PTPN11-201ENST00000351677 TRMUO75648 421 aaKnown RBP15.8■□□□□ 0.12
PTPN11-201ENST00000351677 SLC25A12O75746 678 aa15.8■□□□□ 0.12
PTPN11-201ENST00000351677 TOP3BO95985 862 aaKnown RBP15.8■□□□□ 0.12
PTPN11-201ENST00000351677 SERPINA1P01009 418 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms