RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 CSTF2P33240 577 aaKnown RBP eCLIP14.14□□□□□ -0.15
HMGN3-202ENST00000344726 HADHAP40939 763 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 GRIA1P42261 906 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 SEPT6Q14141 434 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 GPR18Q14330 331 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 KCTD19Q17RG1 926 aaPredicted RBP14.14□□□□□ -0.15
HMGN3-202ENST00000344726 LONRF2Q1L5Z9 754 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 METRNLQ641Q3 311 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 ANKS6Q68DC2 871 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 SNX20Q7Z614 316 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 NXPE1Q8N323 547 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 LILRA3Q8N6C8 439 aaPredicted RBP14.14□□□□□ -0.15
HMGN3-202ENST00000344726 OR52K1Q8NGK4 314 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 ALS2CR12Q96Q35 445 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 FRMD8P1Q9BZ68 369 aaPredicted RBP14.14□□□□□ -0.15
HMGN3-202ENST00000344726 B3GNT4Q9C0J1 378 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 POT1Q9NUX5 634 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 NLE1Q9NVX2 485 aaPredicted RBP14.14□□□□□ -0.15
HMGN3-202ENST00000344726 AKAP7Q9P0M2 348 aaPredicted RBP14.14□□□□□ -0.15
HMGN3-202ENST00000344726 KLHL3Q9UH77 587 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 CRLS1Q9UJA2 301 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 MN1Q10571 1320 aaPredicted RBP14.14□□□□□ -0.15
HMGN3-202ENST00000344726 ZNF462Q96JM2 2506 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 MGAT4DA6NG13 374 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 MROH6A6NGR9 719 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 B4E171 279 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 H7C0S8 307 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 PSMD3O43242 534 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 UBXN7O94888 489 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 SUN1O94901 812 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 C9P02748 559 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 ZSCAN5DPP0CG00 497 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 SPTBP11277 2137 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 ITGALP20701 1170 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 PSMA3P25788 255 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 TSPAN7P41732 249 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 CYP4F2P78329 520 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 RPE65Q16518 533 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 LINC00303Q3SY05 128 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 BCL7AQ4VC05 210 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 CCDC38Q502W7 563 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 TAF1BQ53T94 588 aaPredicted RBP14.13□□□□□ -0.15
HMGN3-202ENST00000344726 FAM129CQ86XR2 697 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 PIANPQ8IYJ0 282 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 TRIM58Q8NG06 486 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 OR2L2Q8NH16 312 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 RSC1A1Q92681 617 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 ULK4Q96C45 1275 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 LRRC45Q96CN5 670 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 CXorf40BQ96DE9 158 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 CDKN2AIPNLQ96HQ2 116 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 ZNF514Q96K75 400 aaPredicted RBP14.13□□□□□ -0.15
HMGN3-202ENST00000344726 CTRCQ99895 268 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 DDA1Q9BW61 102 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 SPRY4Q9C004 299 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 EPB41L1Q9H4G0 881 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 APMAPQ9HDC9 416 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 SLC39A1Q9NY26 324 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 FAM8A1Q9UBU6 413 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 PCDHGA4Q9Y5G9 962 aa14.13□□□□□ -0.15
HMGN3-202ENST00000344726 CFAP20Q9Y6A4 193 aaKnown RBP14.13□□□□□ -0.15
HMGN3-202ENST00000344726 HELZ2Q9BYK8 2649 aaKnown RBP14.12□□□□□ -0.15
HMGN3-202ENST00000344726 IGLV3-16A0A075B6K0 115 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 OR51F1A6NGY5 319 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 STMND1H3BQB6 276 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 FGGP02679 453 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 ACRV1P26436 265 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 CD82P27701 267 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 CXCR5P32302 372 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 FDFT1P37268 417 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 LEPRP48357 1165 aaKnown RBP14.12□□□□□ -0.15
HMGN3-202ENST00000344726 PRLHRP49683 370 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 SEMA5AQ13591 1074 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 CCNG2Q16589 344 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 ZRANB3Q5FWF4 1079 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 MANEAQ5SRI9 462 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 DUS1LQ6P1R4 473 aaKnown RBP14.12□□□□□ -0.15
HMGN3-202ENST00000344726 LINC00523Q86TU6 105 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 SERPINA9Q86WD7 417 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 EXD3Q8N9H8 876 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 STYXQ8WUJ0 223 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 NKD1Q969G9 470 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 RNF31Q96EP0 1072 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 WBP1Q96G27 269 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 LINC00615Q96LM1 132 aaPredicted RBP14.12□□□□□ -0.15
HMGN3-202ENST00000344726 INSM2Q96T92 566 aaPredicted RBP14.12□□□□□ -0.15
HMGN3-202ENST00000344726 COPS8Q99627 209 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 WWP1Q9H0M0 922 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 RAB6BQ9NRW1 208 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 SIDT1Q9NXL6 827 aaKnown RBP14.12□□□□□ -0.15
HMGN3-202ENST00000344726 ZDHHC3Q9NYG2 299 aa14.12□□□□□ -0.15
HMGN3-202ENST00000344726 SNRNP200O75643 2136 aaKnown RBP14.11□□□□□ -0.15
HMGN3-202ENST00000344726 ERI2A8K979 691 aaKnown RBP14.11□□□□□ -0.15
HMGN3-202ENST00000344726 CAPN5O15484 640 aaPredicted RBP14.11□□□□□ -0.15
HMGN3-202ENST00000344726 KIF1CO43896 1103 aaKnown RBP14.11□□□□□ -0.15
HMGN3-202ENST00000344726 MTHFD1P11586 935 aaKnown RBP14.11□□□□□ -0.15
HMGN3-202ENST00000344726 ATP1B2P14415 290 aaPredicted RBP14.11□□□□□ -0.15
HMGN3-202ENST00000344726 RPL22P35268 128 aaKnown RBP14.11□□□□□ -0.15
HMGN3-202ENST00000344726 HALP42357 657 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 CAPZBP47756 277 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms