RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 SUCOQ9UBS9 1254 aaKnown RBP11.53□□□□□ -0.56
SMIM4-201ENST00000307106 CPAMD8Q8IZJ3 1885 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 H3BRJ5 948 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 PRICKLE3O43900 615 aaPredicted RBP11.52□□□□□ -0.57
SMIM4-201ENST00000307106 VEGFDO43915 354 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 PRPSAP2O60256 369 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 JRKO75564 520 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 CDK14O94921 469 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 VCLP18206 1134 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 CAPN3P20807 821 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 AGXTP21549 392 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 CA4P22748 312 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 MIPP30301 263 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 SSTR2P30874 369 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 JAM2P57087 298 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 POLR2FP61218 127 aaKnown RBP11.52□□□□□ -0.57
SMIM4-201ENST00000307106 RPL26P61254 145 aaKnown RBP11.52□□□□□ -0.57
SMIM4-201ENST00000307106 ADCY2Q08462 1091 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 ZNF169Q14929 603 aaPredicted RBP11.52□□□□□ -0.57
SMIM4-201ENST00000307106 SYCP1Q15431 976 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 ZNF789Q5FWF6 425 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 ARMC6Q6NXE6 501 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 FAM180AQ6UWF9 173 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 CYP4V2Q6ZWL3 525 aaPredicted RBP11.52□□□□□ -0.57
SMIM4-201ENST00000307106 PSTKQ8IV42 348 aaKnown RBP11.52□□□□□ -0.57
SMIM4-201ENST00000307106 MMP21Q8N119 569 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 CARFQ8N187 725 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 ZNF808Q8N4W9 903 aaPredicted RBP11.52□□□□□ -0.57
SMIM4-201ENST00000307106 OR1L3Q8NH93 324 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 DNAJB14Q8TBM8 379 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 COG1Q8WTW3 980 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 PPM1MQ96MI6 270 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 DPH2Q9BQC3 489 aaPredicted RBP11.52□□□□□ -0.57
SMIM4-201ENST00000307106 ZSCAN5AQ9BUG6 496 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 NLRC4Q9NPP4 1024 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 ATP13A2Q9NQ11 1180 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 OLAHQ9NV23 265 aa11.52□□□□□ -0.57
SMIM4-201ENST00000307106 RPL26L1Q9UNX3 145 aaKnown RBP11.52□□□□□ -0.57
SMIM4-201ENST00000307106 PTRH2Q9Y3E5 179 aaKnown RBP11.52□□□□□ -0.57
SMIM4-201ENST00000307106 ABCA2Q9BZC7 2435 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 TMEM150CB9EJG8 249 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 RNF8O76064 485 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 ARL4AP40617 200 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 FOLR3P41439 243 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 ARCN1P48444 511 aaKnown RBP11.51□□□□□ -0.57
SMIM4-201ENST00000307106 KPNA2P52292 529 aaKnown RBP11.51□□□□□ -0.57
SMIM4-201ENST00000307106 KCNK10P57789 538 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 OTUD4Q01804 1114 aaKnown RBP11.51□□□□□ -0.57
SMIM4-201ENST00000307106 RPE65Q16518 533 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 QPCTQ16769 361 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 KHDC1Q4VXA5 237 aaKnown RBP11.51□□□□□ -0.57
SMIM4-201ENST00000307106 MLIPQ5VWP3 458 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 ZNF385CQ66K41 422 aaPredicted RBP11.51□□□□□ -0.57
SMIM4-201ENST00000307106 B3GNTL1Q67FW5 361 aaPredicted RBP11.51□□□□□ -0.57
SMIM4-201ENST00000307106 PDPK2PQ6A1A2 396 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 FCRL6Q6DN72 434 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 C11orf96Q7Z7L8 435 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 TRAPPC5Q8IUR0 188 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 TRAM1L1Q8N609 369 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 GPR26Q8NDV2 337 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 HDAC11Q96DB2 347 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 CCDC120Q96HB5 630 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 CNDP1Q96KN2 507 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 AGAP3Q96P47 875 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 GBP5Q96PP8 586 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 NUP85Q9BW27 656 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 SYTL2Q9HCH5 934 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 PSMD13Q9UNM6 376 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 TTLL3Q9Y4R7 772 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 GTF3C1Q12789 2109 aa11.51□□□□□ -0.57
SMIM4-201ENST00000307106 ANKHD1Q8IWZ3 2542 aaKnown RBP11.51□□□□□ -0.57
SMIM4-201ENST00000307106 NIPBLQ6KC79 2804 aaeCLIP11.5□□□□□ -0.57
SMIM4-201ENST00000307106 DNHD1Q96M86 4753 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 SLC9B1P1A6NJY1 282 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 ANKRD66B4E2M5 251 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 KCNN4O15554 427 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 NADKO95544 446 aaPredicted RBP11.5□□□□□ -0.57
SMIM4-201ENST00000307106 CES1P23141 567 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 SERPINB6P35237 376 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 KLK7P49862 253 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 DCDC1P59894 354 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 AIMP2Q13155 320 aaKnown RBP11.5□□□□□ -0.57
SMIM4-201ENST00000307106 CYP2A13Q16696 494 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 ALG1LQ6GMV1 187 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 DUS1LQ6P1R4 473 aaKnown RBP11.5□□□□□ -0.57
SMIM4-201ENST00000307106 IGFL2Q6UWQ7 119 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 B4GALNT4Q76KP1 1039 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 MCOLN2Q8IZK6 566 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 BCORP1Q8N888 145 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 EID2BQ96D98 161 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 C17orf62Q9BQA9 187 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 ZFYVE1Q9HBF4 777 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 IMP3Q9NV31 184 aaKnown RBP11.5□□□□□ -0.57
SMIM4-201ENST00000307106 GPN3Q9UHW5 284 aaPredicted RBP11.5□□□□□ -0.57
SMIM4-201ENST00000307106 SERTAD3Q9UJW9 196 aa11.5□□□□□ -0.57
SMIM4-201ENST00000307106 ZNF469Q96JG9 3925 aaPredicted RBP11.5□□□□□ -0.57
SMIM4-201ENST00000307106 TRGV8A0A0C4DH27 118 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 OR6C74A6NCV1 312 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 E7EQ34 232 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 CCL21O00585 134 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms