RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 MLIPQ5VWP3 458 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 SLX4IPQ5VYV7 408 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 GALNT18Q6P9A2 607 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 TTC23LQ6PF05 361 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 ENPP6Q6UWR7 440 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 ZNF783Q6ZMS7 281 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 PID1Q7Z2X4 250 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 LRRTM3Q86VH5 581 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 DDIASQ8IXT1 998 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 KLHDC8AQ8IYD2 350 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 SIX6OS1Q8N1H7 587 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 FAM181AQ8N9Y4 354 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 IL17RDQ8NFM7 739 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 OR10T2Q8NGX3 314 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 DNAJB3Q8WWF6 145 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 MYLPFQ96A32 169 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 ABHD8Q96I13 439 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 MGME1Q9BQP7 344 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 TKTL2Q9H0I9 626 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 TRPV6Q9H1D0 765 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 TRIT1Q9H3H1 467 aaKnown RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 POLR1BQ9H9Y6 1135 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 EML4Q9HC35 981 aaKnown RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 THEGQ9P2T0 379 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 EGFL7Q9UHF1 273 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 FBXO5Q9UKT4 447 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 MAGED2Q9UNF1 606 aaPredicted RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 HS3ST4Q9Y661 456 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 OR2A25A4D2G3 310 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 C9JVG2 144 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 UBXN8O00124 270 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 IFRD1O00458 451 aaPredicted RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 CA12O43570 354 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 PFDN1O60925 122 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 SEC22BO75396 215 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 SIX3O95343 332 aaPredicted RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 VNN2O95498 520 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 LTA4HP09960 611 aaKnown RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 PAMP19021 973 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 CXCR2P25025 360 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 CLCN4P51793 760 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 ZNF140P52738 457 aaPredicted RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 WNT3AP56704 352 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 MAP3K7CLP57077 242 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 YBEYP58557 167 aaPredicted RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 UFM1P61960 85 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 ECT2LQ008S8 904 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 PIK3R6Q5UE93 754 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 UBE2UQ5VVX9 321 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 MOB2Q70IA6 237 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 C14orf80Q86SX3 495 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 TERB1Q8NA31 727 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 PPHLN1Q8NEY8 458 aaKnown RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 TWIST2Q8WVJ9 160 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 FUBP1Q96AE4 644 aaKnown RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 MTG1Q9BT17 334 aaPredicted RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 C9orf16Q9BUW7 83 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 DERL2Q9GZP9 239 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 TOR3AQ9H497 397 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 ALG2Q9H553 416 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 TRNAU1APQ9NX07 287 aaKnown RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 SIRT5Q9NXA8 310 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 UBP1Q9NZI7 540 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 KLHL42Q9P2K6 505 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 INTS6Q9UL03 887 aaKnown RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 NDRG4Q9ULP0 352 aaKnown RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 E9PAM4 449 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 SLC1A7O00341 560 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 SYN3O14994 580 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 GPR182O15218 404 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 LATS1O95835 1130 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 HNRNPCP07910 306 aaKnown RBP eCLIP5.37□□□□□ -1.55
VPS50-202ENST00000305866 FAM157BP0CG42 384 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 PRSS56P0CW18 603 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 STMN1P16949 149 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 PRPH2P23942 346 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 IST1P53990 364 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 C21orf59P57076 290 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 C21orf58P58505 322 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 MVKQ03426 396 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 SLC14A1Q13336 389 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 TUSC3Q13454 348 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 SERINC3Q13530 473 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 CTSL3PQ5NE16 218 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 EGFLAMQ63HQ2 1017 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 PLEKHG7Q6ZR37 379 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 SFRP1Q8N474 314 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 ZNF513Q8N8E2 541 aaPredicted RBP5.37□□□□□ -1.55
VPS50-202ENST00000305866 UBTD2Q8WUN7 234 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 TMBIM1Q969X1 311 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 SERPINB11Q96P15 392 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 CRISPLD1Q9H336 500 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 KLHL8Q9P2G9 620 aaPredicted RBP5.37□□□□□ -1.55
VPS50-202ENST00000305866 PIN4Q9Y237 131 aaKnown RBP5.37□□□□□ -1.55
VPS50-202ENST00000305866 INVSQ9Y283 1065 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 NDUFAF1Q9Y375 327 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 KCTD3Q9Y597 815 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 A0A0B4J293 547 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 ATP6AP2A0A1C7CYW4 349 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 PRAMEF25A6NGN4 478 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms