RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ZNF510Q9Y2H8 683 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SMIM35A0A1B0GVV1 85 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 S100GP29377 79 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 DPYSQ14117 519 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 LCLAT1Q6UWP7 414 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 STRADAQ7RTN6 431 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ZNF280BQ86YH2 543 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ARL10Q8N8L6 244 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SLC4A11Q8NBS3 891 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PHPT1Q9NRX4 125 aaPredicted RBP13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 RAPGEFL1Q9UHV5 662 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 BBIP1A8MTZ0 92 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 RGS10O43665 173 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TGFBR2P37173 567 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 RGS8P57771 180 aaPredicted RBP13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MYBPC3Q14896 1274 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 UBXN11Q5T124 520 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 DCST1Q5T197 706 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 EGFLAMQ63HQ2 1017 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MED27Q6P2C8 311 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CBR4Q8N4T8 237 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 HEXDCQ8WVB3 486 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TFAP2BQ92481 460 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CKLFQ9UBR5 152 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 IRAK3Q9Y616 596 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MROH2AA6NES4 1674 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PCP4L1A6NKN8 68 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SMAD9O15198 467 aaKnown RBP13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SEPT4O43236 478 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 INMTO95050 263 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CHIT1Q13231 466 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SMU1Q2TAY7 513 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FSTL4Q6MZW2 842 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 YTHDF3Q7Z739 585 aaKnown RBP13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 DMRTB1Q96MA1 342 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MMP8P22894 467 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FMO3P31513 532 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CA9Q16790 459 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SNX20Q7Z614 316 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MCEMP1Q8IX19 187 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TOP1MTQ969P6 601 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 STOML2Q9UJZ1 356 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 COMMD3-BMI1R4GMX3 469 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 A8MUA0 341 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 STK16O75716 305 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PEX2P28328 305 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 BCAP31P51572 246 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 LARS2Q15031 903 aaKnown RBP13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 BMT2Q1RMZ1 405 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 DLK2Q6UY11 383 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TMPRSS11AQ6ZMR5 421 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MPP5Q8N3R9 675 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 STYXQ8WUJ0 223 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PIWIL1Q96J94 861 aaKnown RBP13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 COL20A1Q9P218 1284 aa13.42□□□□□ -0.26
CHRFAM7A-201ENST00000299847 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 THRBP10828 461 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TTKP33981 857 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ERVK-21P61565 698 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SULT2A1Q06520 285 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FKBP1CQ5VVH2 108 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 UPF1Q92900 1129 aaKnown RBP eCLIP13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 KCNN2Q9H2S1 579 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 AP2A1O95782 977 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 LAMP2P13473 410 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CD247P20963 164 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 IDSP22304 550 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 RASGEF1CQ8N431 466 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SCAMP5Q8TAC9 235 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 LENG8Q96PV6 779 aaPredicted RBP13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 RBM4BQ9BQ04 359 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 RBM4Q9BWF3 364 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TMEM165Q9HC07 324 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ZNF541Q9H0D2 1346 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MYBPHLA2RUH7 354 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 INSIG1O15503 277 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 RSL1D1O76021 490 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TPSB2P20231 275 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TXNL4AP83876 142 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SLC13A2Q13183 592 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TPSAB1Q15661 275 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 AMZ1Q400G9 498 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 METTL3Q86U44 580 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 OR10H4Q8NGA5 316 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 POF1BQ8WVV4 589 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ARNTL2Q8WYA1 636 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MRPS33Q9Y291 106 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 S100A9P06702 114 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 IL12BP29460 328 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 DGKEP52429 567 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TMEM214Q6NUQ4 689 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 HID1Q8IV36 788 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 NAXEQ8NCW5 288 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 AUTS2Q8WXX7 1259 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 KLRG1Q96E93 195 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CCDC177Q9NQR7 707 aaPredicted RBP13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MED31Q9Y3C7 131 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PCDHB1Q9Y5F3 818 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CPQQ9Y646 472 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms