RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 OR10H4Q8NGA5 316 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 TWIST2Q8WVJ9 160 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 EXOSC8Q96B26 276 aaKnown RBP5.5□□□□□ -1.53
CPSF2-201ENST00000298875 MYO19Q96H55 970 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 BTF3L4Q96K17 158 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 ADAM2Q99965 735 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 MRPL45Q9BRJ2 306 aaKnown RBP5.5□□□□□ -1.53
CPSF2-201ENST00000298875 FANCFQ9NPI8 374 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 CUEDC1Q9NWM3 386 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-201ENST00000298875 ASF1AQ9Y294 204 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 MYH11P35749 1972 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 PITPNM1O00562 1244 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 DDX6P26196 483 aaKnown RBP eCLIP5.5□□□□□ -1.53
CPSF2-201ENST00000298875 ICAM3P32942 547 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 CRHR1P34998 444 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 CASP9P55211 416 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 OGFOD2Q6N063 350 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 ZNF662Q6ZS27 426 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 RANBP3LQ86VV4 465 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-201ENST00000298875 OR6K2Q8NGY2 324 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 NXNL1Q96CM4 212 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 GAD1Q99259 594 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 SEMA3CQ99985 751 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 MALT1Q9UDY8 824 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 PPLO60437 1756 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 DDTLA6NHG4 134 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-201ENST00000298875 ZSCAN5BA6NJL1 495 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 C1QTNF3-AMACRE9PGA6 284 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 FFAR2O15552 330 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 SLC25A14O95258 325 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-201ENST00000298875 TXNL4AP83876 142 aaKnown RBP5.5□□□□□ -1.53
CPSF2-201ENST00000298875 DEFA5Q01523 94 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 LARS2Q15031 903 aaKnown RBP5.5□□□□□ -1.53
CPSF2-201ENST00000298875 UBAP2Q5T6F2 1119 aaKnown RBP5.5□□□□□ -1.53
CPSF2-201ENST00000298875 DUPD1Q68J44 220 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 CCDC71Q8IV32 467 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-201ENST00000298875 MCEMP1Q8IX19 187 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 ZBTB2Q8N680 514 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 SENP8Q96LD8 212 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 TM6SF2Q9BZW4 377 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 TAS2R7Q9NYW3 318 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 SLC27A6Q9Y2P4 619 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 ILVBLA1L0T0 632 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 C5orf51A6NDU8 294 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 OR2AT4A6NND4 320 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 TNFRSF11BO00300 401 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 AIREO43918 545 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 EDF1O60869 148 aaKnown RBP5.5□□□□□ -1.53
CPSF2-201ENST00000298875 PAGE1O75459 146 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 ALDH4A1P30038 563 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 RARRES1P49788 294 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 DCST1Q5T197 706 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 VWA5B1Q5TIE3 1220 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 PIGXQ8TBF5 258 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 LGR4Q9BXB1 951 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 TMEM88BA6NKF7 163 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 FADS2P1A8MWK0 482 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 TSTD3H0UI37 97 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 ATG13O75143 517 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 ANGPTL1O95841 491 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 HSD3B2P26439 372 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 MATKP42679 507 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 SCNN1GP51170 649 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 USP43Q70EL4 1123 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 TMC8Q8IU68 726 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 BIRC8Q96P09 236 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 GBA2Q9HCG7 927 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-201ENST00000298875 SMPD3Q9NY59 655 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-201ENST00000298875 SPATA7Q9P0W8 599 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 MYO10Q9HD67 2058 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 ARHGEF28Q8N1W1 1705 aaKnown RBP5.5□□□□□ -1.53
CPSF2-201ENST00000298875 VSTM5A8MXK1 200 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 SDHAF4Q5VUM1 108 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 KCTD8Q6ZWB6 473 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 CADM2Q8N3J6 435 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 LPPQ93052 612 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 PPM1MQ96MI6 270 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 PORCNQ9H237 461 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 TESMINQ9Y4I5 508 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 EPCAMP16422 314 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 IL32P24001 234 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 CREMQ03060 361 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 FAM71AQ8IYT1 594 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 LSM14AQ8ND56 463 aaKnown RBP5.5□□□□□ -1.53
CPSF2-201ENST00000298875 ZNF570Q96NI8 536 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 HIPK3Q9H422 1215 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 HPF1Q9NWY4 346 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 ZNF639Q9UID6 485 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 MED1Q15648 1581 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-201ENST00000298875 SCGB1D2O95969 90 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 SEC23AQ15436 765 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 NAT16Q8N8M0 369 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 SLC39A3Q9BRY0 314 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 ASB7Q9H672 318 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 SLC27A5Q9Y2P5 690 aa5.5□□□□□ -1.53
CPSF2-201ENST00000298875 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 FAM149AA5PLN7 773 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 MSI1O43347 362 aaKnown RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 CYP2C18P33260 490 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 CNTN2Q02246 1040 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms