RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 SLC25A11Q02978 314 aaKnown RBP12.64□□□□□ -0.39
PTCD1-201ENST00000292478 INCA1Q0VD86 236 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 HEPACAMQ14CZ8 416 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 SH3PXD2AQ5TCZ1 1133 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 PRR23BQ6ZRT6 265 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 KBTBD2Q8IY47 623 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 CPNE9Q8IYJ1 553 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 AZIN2Q96A70 460 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 RAB11FIP5Q9BXF6 653 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 ZNF536O15090 1300 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 NADKO95544 446 aaPredicted RBP12.63□□□□□ -0.39
PTCD1-201ENST00000292478 CHRNGP07510 517 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 KCTD21Q4G0X4 260 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 PAOXQ6QHF9 649 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 ARL14EPQ8N8R7 260 aaPredicted RBP12.63□□□□□ -0.39
PTCD1-201ENST00000292478 PSMA8Q8TAA3 256 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 RAD51AP1Q96B01 352 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 ABCB10Q9NRK6 738 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 POLR3BQ9NW08 1133 aaPredicted RBP12.63□□□□□ -0.39
PTCD1-201ENST00000292478 ZNF282Q9UDV7 671 aaPredicted RBP12.63□□□□□ -0.39
PTCD1-201ENST00000292478 EIF2B4Q9UI10 523 aaKnown RBP12.63□□□□□ -0.39
PTCD1-201ENST00000292478 HEBP2Q9Y5Z4 205 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.63□□□□□ -0.39
PTCD1-201ENST00000292478 AQP12BA6NM10 295 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 MAGEB17A8MXT2 336 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 FOXN2P32314 431 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 RPS14P62263 151 aaKnown RBP12.63□□□□□ -0.39
PTCD1-201ENST00000292478 ERVK-8P63133 956 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 NRG1Q02297 640 aaPredicted RBP12.63□□□□□ -0.39
PTCD1-201ENST00000292478 AQP12AQ8IXF9 295 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 STON1Q9Y6Q2 735 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 K7EPI3 171 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 PI15O43692 258 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 CYP4B1P13584 511 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 IGFBP4P22692 258 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 MAPK12P53778 367 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 ATXN1P54253 815 aaKnown RBP12.63□□□□□ -0.39
PTCD1-201ENST00000292478 RAB25P57735 213 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 LSM3P62310 102 aaKnown RBP12.63□□□□□ -0.39
PTCD1-201ENST00000292478 ADGRE1Q14246 886 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 LIN52Q52LA3 116 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 DCST1Q5T197 706 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 TIFABQ6ZNK6 161 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 KRT77Q7Z794 578 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 ZZZ3Q8IYH5 903 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 CFAP206Q8IYR0 622 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 SLC13A3Q8WWT9 602 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 ABCG8Q9H221 673 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 VIPP01282 170 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 EPHX1P07099 455 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 SP100P23497 879 aaPredicted RBP12.63□□□□□ -0.39
PTCD1-201ENST00000292478 MSX2P35548 267 aaPredicted RBP12.63□□□□□ -0.39
PTCD1-201ENST00000292478 EEFSECP57772 596 aaKnown RBP12.63□□□□□ -0.39
PTCD1-201ENST00000292478 SYPL2Q5VXT5 272 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 SLC39A4Q6P5W5 647 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 ZNF730Q6ZMV8 503 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 SLC38A4Q969I6 547 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 ERLEC1Q96DZ1 483 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 ZNF347Q96SE7 839 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 ATG10Q9H0Y0 220 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 POMPQ9Y244 141 aa12.63□□□□□ -0.39
PTCD1-201ENST00000292478 TRMUO75648 421 aaKnown RBP12.62□□□□□ -0.39
PTCD1-201ENST00000292478 DGKGP49619 791 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 WDR4P57081 412 aaKnown RBP12.62□□□□□ -0.39
PTCD1-201ENST00000292478 STXBP1P61764 594 aaKnown RBP12.62□□□□□ -0.39
PTCD1-201ENST00000292478 BNC1Q01954 994 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 CARD16Q5EG05 197 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 ATAT1Q5SQI0 421 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 DNAJB7Q7Z6W7 309 aaPredicted RBP12.62□□□□□ -0.39
PTCD1-201ENST00000292478 CIR1Q86X95 450 aaPredicted RBP12.62□□□□□ -0.39
PTCD1-201ENST00000292478 RELL1Q8IUW5 271 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 MCFD2Q8NI22 146 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 C8orf48Q96LL4 319 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 SMOC2Q9H3U7 446 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 KLHL31Q9H511 634 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 MRM3Q9HC36 420 aaKnown RBP12.62□□□□□ -0.39
PTCD1-201ENST00000292478 NECTIN3Q9NQS3 549 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 LTBP3Q9NS15 1303 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 FOXO6A8MYZ6 492 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 GNAZP19086 355 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 DDX6P26196 483 aaKnown RBP eCLIP12.62□□□□□ -0.39
PTCD1-201ENST00000292478 TGFBR2P37173 567 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 ACLYP53396 1101 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 RPL26P61254 145 aaKnown RBP12.62□□□□□ -0.39
PTCD1-201ENST00000292478 CYP4F2P78329 520 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 CYP4F3Q08477 520 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 BLMHQ13867 455 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 OLFML1Q6UWY5 402 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 SLC34A3Q8N130 599 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 FAM98AQ8NCA5 519 aaKnown RBP12.62□□□□□ -0.39
PTCD1-201ENST00000292478 TCF25Q9BQ70 676 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 SCML2Q9UQR0 700 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 CXCR6O00574 342 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 PGRMC2O15173 223 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 SRPRAP08240 638 aaKnown RBP12.62□□□□□ -0.39
PTCD1-201ENST00000292478 RAP2AP10114 183 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 KHDC1Q4VXA5 237 aaKnown RBP12.62□□□□□ -0.39
PTCD1-201ENST00000292478 CBR4Q8N4T8 237 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 TOP1MTQ969P6 601 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 SYT17Q9BSW7 474 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 190.6 ms