RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SPANXN4Q5MJ08 99 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 CST9Q5W186 159 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 ADCK1Q86TW2 530 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 MDGA1Q8NFP4 955 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 GIPC3Q8TF64 312 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 MRPS31Q92665 395 aaKnown RBP15.68■□□□□ 0.1
SMAD6-201ENST00000288840 FUBP1Q96AE4 644 aaKnown RBP15.68■□□□□ 0.1
SMAD6-201ENST00000288840 MYO19Q96H55 970 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 RANBP9Q96S59 729 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 A0A1B0GVM2 712 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 LCHNA4D1U4 455 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 M0QZQ0 153 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 UGT2B4P06133 528 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 FAM163BP0C2L3 166 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 FDXRP22570 491 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 DGKAP23743 735 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 CSKP41240 450 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 MAPKAPK2P49137 400 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 CCR3P51677 355 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 C21orf59P57076 290 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 ERVK-8P63133 956 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 CNTN4Q8IWV2 1026 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 C2orf73Q8N5S3 287 aaPredicted RBP15.68■□□□□ 0.1
SMAD6-201ENST00000288840 KRTCAP2Q8N6L1 136 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 SPPL2AQ8TCT8 520 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 ISL2Q96A47 359 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 UBXN10Q96LJ8 280 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 MUS81Q96NY9 551 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 MOSPD1Q9UJG1 213 aa15.68■□□□□ 0.1
SMAD6-201ENST00000288840 SYNDIG1LA6NDD5 238 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 OR2AG2A6NM03 316 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 ATXN1LP0C7T5 689 aaKnown RBP15.67■□□□□ 0.1
SMAD6-201ENST00000288840 OGNP20774 298 aaKnown RBP15.67■□□□□ 0.1
SMAD6-201ENST00000288840 CDH4P55283 916 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 STARD3Q14849 445 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 TMEM102Q8N9M5 508 aaPredicted RBP15.67■□□□□ 0.1
SMAD6-201ENST00000288840 C1orf74Q96LT6 269 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 SMG9Q9H0W8 520 aaKnown RBP15.67■□□□□ 0.1
SMAD6-201ENST00000288840 AMBNQ9NP70 447 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 FARSBQ9NSD9 589 aaKnown RBP15.67■□□□□ 0.1
SMAD6-201ENST00000288840 KRT87PA6NCN2 255 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 hCG_2039718K7EN88 272 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 TNFRSF10BO14763 440 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 COCHO43405 550 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 HSMCR30P0CW71 290 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 MAGP20916 626 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 SOAT1P35610 550 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 SP3Q02447 781 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 ELAVL2Q12926 359 aaKnown RBP15.67■□□□□ 0.1
SMAD6-201ENST00000288840 SPATA19Q7Z5L4 167 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 EID3Q8N140 333 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 TMBIM1Q969X1 311 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 C8orf48Q96LL4 319 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 MRM3Q9HC36 420 aaKnown RBP15.67■□□□□ 0.1
SMAD6-201ENST00000288840 ACTR3BQ9P1U1 418 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 MAP10Q9P2G4 905 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 BLOC1S6Q9UL45 172 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 RNF11Q9Y3C5 154 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 TNPO3Q9Y5L0 923 aaKnown RBP15.67■□□□□ 0.1
SMAD6-201ENST00000288840 LINC00854A0A1B0GVQ3 168 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 PRKD3O94806 890 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 HOXD10P28358 340 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 GABRR2P28476 465 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 CYP4F8P98187 520 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 RFTN1Q14699 578 aaPredicted RBP15.67■□□□□ 0.1
SMAD6-201ENST00000288840 GTDC1Q4AE62 458 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 FIBCD1Q8N539 461 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 CD99L2Q8TCZ2 262 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 ZFAND2BQ8WV99 257 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 C12orf43Q96C57 262 aaKnown RBP15.67■□□□□ 0.1
SMAD6-201ENST00000288840 UGT2B28Q9BY64 529 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 CPQQ9Y646 472 aa15.67■□□□□ 0.1
SMAD6-201ENST00000288840 TARM1B6A8C7 271 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 PAPSS2O95340 614 aaPredicted RBP15.66■□□□□ 0.1
SMAD6-201ENST00000288840 HOXD8P13378 290 aaPredicted RBP15.66■□□□□ 0.1
SMAD6-201ENST00000288840 CLK1P49759 484 aaKnown RBP15.66■□□□□ 0.1
SMAD6-201ENST00000288840 NAA20P61599 178 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 DMC1Q14565 340 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 TCEA2Q15560 299 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 TXNDC11Q6PKC3 985 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 C11orf96Q7Z7L8 435 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 TMEM173Q86WV6 379 aaPredicted RBP15.66■□□□□ 0.1
SMAD6-201ENST00000288840 SYT12Q8IV01 421 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 SFRP1Q8N474 314 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 TTC30BQ8N4P2 665 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 C2orf49Q9BVC5 232 aaPredicted RBP15.66■□□□□ 0.1
SMAD6-201ENST00000288840 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.66■□□□□ 0.1
SMAD6-201ENST00000288840 LRTM1Q9HBL6 345 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 ZNF229Q9UJW7 825 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 TBC1D30Q9Y2I9 924 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 PTPRFP10586 1907 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 TTC36A6NLP5 189 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 GLUD1P00367 558 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 CYP11A1P05108 521 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 URODP06132 367 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 ANXA5P08758 320 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 ZNF26P17031 533 aaPredicted RBP15.66■□□□□ 0.1
SMAD6-201ENST00000288840 GNPDA1P46926 289 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 RPIAP49247 311 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 EPHB3P54753 998 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms