RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 FAM96AQ9H5X1 160 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 NLE1Q9NVX2 485 aaPredicted RBP15.72■□□□□ 0.11
BRCA1-228ENST00000618469 WDR70Q9NW82 654 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 SLC30A1Q9Y6M5 507 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 UNC13CQ8NB66 2214 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 PRR19A6NJB7 356 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 OR5K4A6NMS3 321 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 TMX2-CTNND1H3BSU7 103 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 DUX1O43812 170 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 RPL10P27635 214 aaKnown RBP15.71■□□□□ 0.11
BRCA1-228ENST00000618469 GRIA1P42261 906 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 MAPK9P45984 424 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 DRG2P55039 364 aaKnown RBP15.71■□□□□ 0.11
BRCA1-228ENST00000618469 KCTD19Q17RG1 926 aaPredicted RBP15.71■□□□□ 0.11
BRCA1-228ENST00000618469 ZRANB3Q5FWF4 1079 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 TMEM220Q6QAJ8 160 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 USP53Q70EK8 1073 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 PIM3Q86V86 326 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 AMZ2Q86W34 360 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 TRIM48Q8IWZ4 208 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 LSMEM2Q8N112 164 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 RASGEF1CQ8N431 466 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 BEND7Q8N7W2 519 aaPredicted RBP15.71■□□□□ 0.11
BRCA1-228ENST00000618469 AVL9Q8NBF6 648 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 STYXQ8WUJ0 223 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 TTC9Q92623 222 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 CCDC97Q96F63 343 aaPredicted RBP15.71■□□□□ 0.11
BRCA1-228ENST00000618469 DCUN1D1Q96GG9 259 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 AHCYL2Q96HN2 611 aaKnown RBP15.71■□□□□ 0.11
BRCA1-228ENST00000618469 PBKQ96KB5 322 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 HOMER3Q9NSC5 361 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 SMARCAL1Q9NZC9 954 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 SCHIP1Q9P0W5 487 aaPredicted RBP15.71■□□□□ 0.11
BRCA1-228ENST00000618469 CPNE7Q9UBL6 633 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 FAM8A1Q9UBU6 413 aa15.71■□□□□ 0.11
BRCA1-228ENST00000618469 DRG1Q9Y295 367 aaKnown RBP15.71■□□□□ 0.11
BRCA1-228ENST00000618469 HEATR9A2RTY3 570 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 USP27XA6NNY8 438 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 AGAP14A8MT82 685 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 CFAP99D6REC4 459 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 H7C0S8 307 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 PGRMC1O00264 195 aaKnown RBP15.7■□□□□ 0.1
BRCA1-228ENST00000618469 PLD2O14939 933 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 POP7O75817 140 aaKnown RBP15.7■□□□□ 0.1
BRCA1-228ENST00000618469 DXOO77932 396 aaKnown RBP15.7■□□□□ 0.1
BRCA1-228ENST00000618469 WISP1O95388 367 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 PRSS56P0CW18 603 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 RALBP11234 206 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 HGFP14210 728 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 IDSP22304 550 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 CD1CP29017 333 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 RBMS1P29558 406 aaKnown RBP15.7■□□□□ 0.1
BRCA1-228ENST00000618469 UBE2IP63279 158 aaKnown RBP15.7■□□□□ 0.1
BRCA1-228ENST00000618469 GPLD1P80108 840 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 EIF3IQ13347 325 aaKnown RBP15.7■□□□□ 0.1
BRCA1-228ENST00000618469 NFE2L1Q14494 772 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 RAB11FIP2Q7L804 512 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 OR10G6Q8NH81 332 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 SH3KBP1Q96B97 665 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 SGF29Q96ES7 293 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 ZNF514Q96K75 400 aaPredicted RBP15.7■□□□□ 0.1
BRCA1-228ENST00000618469 ZNF578Q96N58 590 aaPredicted RBP15.7■□□□□ 0.1
BRCA1-228ENST00000618469 OSBPL9Q96SU4 736 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 COPS8Q99627 209 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 AP1M1Q9BXS5 423 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 SEMA6CQ9H3T2 930 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 ASCL3Q9NQ33 180 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 CASS4Q9NQ75 786 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 EIF2B3Q9NR50 452 aaKnown RBP15.7■□□□□ 0.1
BRCA1-228ENST00000618469 THSD1Q9NS62 852 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 LOXL2Q9Y4K0 774 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 PCDHGA8Q9Y5G5 932 aa15.7■□□□□ 0.1
BRCA1-228ENST00000618469 PIEZO2Q9H5I5 2752 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 MROH6A6NGR9 719 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 OR52A4PA6NMU1 304 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 TNFSF15O95150 251 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 VIPP01282 170 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 JMJD7P0C870 316 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 BRAFP15056 766 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 ACRV1P26436 265 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 HALP42357 657 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 VPS41P49754 854 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 CDKN1CP49918 316 aaPredicted RBP15.69■□□□□ 0.1
BRCA1-228ENST00000618469 ARSDP51689 593 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 ZFP36L1Q07352 338 aaKnown RBP15.69■□□□□ 0.1
BRCA1-228ENST00000618469 DMPKQ09013 629 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 TRIP13Q15645 432 aaPredicted RBP15.69■□□□□ 0.1
BRCA1-228ENST00000618469 CLPPQ16740 277 aaPredicted RBP15.69■□□□□ 0.1
BRCA1-228ENST00000618469 GPR33Q49SQ1 333 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 BCL7AQ4VC05 210 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 AGAP9Q5VTM2 703 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 TTC27Q6P3X3 843 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 C4orf22Q6V702 233 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 FAM83HQ6ZRV2 1179 aaPredicted RBP15.69■□□□□ 0.1
BRCA1-228ENST00000618469 TAS2R42Q7RTR8 314 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 FBXO39Q8N4B4 442 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 COG1Q8WTW3 980 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 CXorf40BQ96DE9 158 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 PRR11Q96HE9 360 aaPredicted RBP15.69■□□□□ 0.1
BRCA1-228ENST00000618469 CDKN2AIPNLQ96HQ2 116 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms