RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 EFCAB7A8K855 629 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 HGSO14964 777 aaPredicted RBP12.06□□□□□ -0.48
CTSA-210ENST00000606000 ZW10O43264 779 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 XRCC1P18887 633 aaPredicted RBP12.06□□□□□ -0.48
CTSA-210ENST00000606000 CXCR5P32302 372 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 LEPRP48357 1165 aaKnown RBP12.06□□□□□ -0.48
CTSA-210ENST00000606000 EPHA4P54764 986 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 PPP1CAP62136 330 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 DMPKQ09013 629 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 GPR18Q14330 331 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 CLPPQ16740 277 aaPredicted RBP12.06□□□□□ -0.48
CTSA-210ENST00000606000 ZNF662Q6ZS27 426 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 VASH2Q86V25 355 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 AMZ2Q86W34 360 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 FAM129CQ86XR2 697 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 RSC1A1Q92681 617 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 ART4Q93070 314 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 TMEM159Q96B96 161 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 SH3KBP1Q96B97 665 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 ALS2CR12Q96Q35 445 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 DPH1Q9BZG8 443 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 GRPEL1Q9HAV7 217 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 POT1Q9NUX5 634 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 NLE1Q9NVX2 485 aaPredicted RBP12.06□□□□□ -0.48
CTSA-210ENST00000606000 PDP2Q9P2J9 529 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 AGAP14A8MT82 685 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 NVLO15381 856 aaKnown RBP12.05□□□□□ -0.48
CTSA-210ENST00000606000 EFSO43281 561 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 ZNF189O75820 626 aaPredicted RBP12.05□□□□□ -0.48
CTSA-210ENST00000606000 UBXN7O94888 489 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 LIPCP11150 499 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 VCLP18206 1134 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 ITGALP20701 1170 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 CSTF2P33240 577 aaKnown RBP eCLIP12.05□□□□□ -0.48
CTSA-210ENST00000606000 TMPRSS3P57727 454 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 TRA2AQ13595 282 aaKnown RBP eCLIP12.05□□□□□ -0.48
CTSA-210ENST00000606000 LONRF2Q1L5Z9 754 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 ZRANB3Q5FWF4 1079 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 AGAP9Q5VTM2 703 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 BROXQ5VW32 411 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 ANKS6Q68DC2 871 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 WDR74Q6RFH5 385 aaPredicted RBP12.05□□□□□ -0.48
CTSA-210ENST00000606000 WASH2PQ6VEQ5 465 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 GPR155Q7Z3F1 870 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 ARHGAP22Q7Z5H3 698 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 SNX20Q7Z614 316 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 NXPE1Q8N323 547 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 BMPERQ8N8U9 685 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 AGBL5Q8NDL9 886 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 CXorf40BQ96DE9 158 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 CTRCQ99895 268 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.05□□□□□ -0.48
CTSA-210ENST00000606000 WWP1Q9H0M0 922 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 APMAPQ9HDC9 416 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 SLC40A1Q9NP59 571 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 WASH6PQ9NQA3 447 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.05□□□□□ -0.48
CTSA-210ENST00000606000 SLC2A6Q9UGQ3 507 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 FEZ2Q9UHY8 353 aaPredicted RBP12.05□□□□□ -0.48
CTSA-210ENST00000606000 ACSL6Q9UKU0 697 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 B3GALT1Q9Y5Z6 326 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 ACACAQ13085 2346 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 MN1Q10571 1320 aaPredicted RBP12.05□□□□□ -0.48
CTSA-210ENST00000606000 SDK2Q58EX2 2172 aa12.05□□□□□ -0.48
CTSA-210ENST00000606000 ITPR1Q14643 2758 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 MGAT4DA6NG13 374 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 KIF1CO43896 1103 aaKnown RBP12.04□□□□□ -0.48
CTSA-210ENST00000606000 FGGP02679 453 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 PRB1P04280 392 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 WT1P19544 449 aaPredicted RBP12.04□□□□□ -0.48
CTSA-210ENST00000606000 ACRV1P26436 265 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 RPL22P35268 128 aaKnown RBP12.04□□□□□ -0.48
CTSA-210ENST00000606000 HADHAP40939 763 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 HALP42357 657 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 KCNJ1P48048 391 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 PRLHRP49683 370 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 PDE1BQ01064 536 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 RPE65Q16518 533 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 BCL7AQ4VC05 210 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 KIAA1614Q5VZ46 1190 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 PCSK4Q6UW60 755 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 SERPINA9Q86WD7 417 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 PIANPQ8IYJ0 282 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 OR2L2Q8NH16 312 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 ULK4Q96C45 1275 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 LRRC45Q96CN5 670 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 CDKN2AIPNLQ96HQ2 116 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 RMDN2Q96LZ7 410 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 ZNF778Q96MU6 729 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 TGM7Q96PF1 710 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 INSM2Q96T92 566 aaPredicted RBP12.04□□□□□ -0.48
CTSA-210ENST00000606000 COPS8Q99627 209 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 DPYSL5Q9BPU6 564 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 FRMD8P1Q9BZ68 369 aaPredicted RBP12.04□□□□□ -0.48
CTSA-210ENST00000606000 UCK1Q9HA47 277 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 RAB6BQ9NRW1 208 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 IMP3Q9NV31 184 aaKnown RBP12.04□□□□□ -0.48
CTSA-210ENST00000606000 SLC39A1Q9NY26 324 aa12.04□□□□□ -0.48
CTSA-210ENST00000606000 AKAP7Q9P0M2 348 aaPredicted RBP12.04□□□□□ -0.48
CTSA-210ENST00000606000 TRBV5-4A0A0C4DH59 114 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms