RNA–Protein interactions for RNA: ENST00000598355.1

TRIM28-213, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-213ENST00000598355 MPOP05164 745 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 PRSS56P0CW18 603 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 IDSP22304 550 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 ALDH4A1P30038 563 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 SLC19A1P41440 591 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 LMAN1P49257 510 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 ITIH4Q14624 930 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 DBN1Q16643 649 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 MAP9Q49MG5 647 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 METRNLQ641Q3 311 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 PACS1Q6VY07 963 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 ZNF574Q6ZN55 896 aaPredicted RBP15.84■□□□□ 0.13
TRIM28-213ENST00000598355 FAM83HQ6ZRV2 1179 aaPredicted RBP15.84■□□□□ 0.13
TRIM28-213ENST00000598355 NLRP9Q7RTR0 991 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 SERPINA9Q86WD7 417 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 LSMEM2Q8N112 164 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 OR4D9Q8NGE8 314 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 OR2L2Q8NH16 312 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 WDR36Q8NI36 951 aaKnown RBP15.84■□□□□ 0.13
TRIM28-213ENST00000598355 SLCO2A1Q92959 643 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 SGF29Q96ES7 293 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 DPYSL5Q9BPU6 564 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 FOXP3Q9BZS1 431 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 IL22Q9GZX6 179 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 EPB41L1Q9H4G0 881 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 STN1Q9H668 368 aaKnown RBP15.84■□□□□ 0.13
TRIM28-213ENST00000598355 RDH14Q9HBH5 336 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 TREX1Q9NSU2 369 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 KCNK4Q9NYG8 393 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 SLC2A6Q9UGQ3 507 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 WDR37Q9Y2I8 494 aa15.84■□□□□ 0.13
TRIM28-213ENST00000598355 A0A087WV48 116 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 TCRBV7S3A2A0A539 114 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 CCDC162PA2VCL2 907 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 PMS2P1A4D2B8 440 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 PDZK1P1A8MUH7 402 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 CFAP99D6REC4 459 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 TMEM63AO94886 807 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 KRT14P02533 472 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 THRAP10827 490 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 RALBP11234 206 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 ATP1B2P14415 290 aaPredicted RBP15.83■□□□□ 0.12
TRIM28-213ENST00000598355 LIMK2P53671 638 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 ERVPABLB-1P60509 514 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 NFE2L1Q14494 772 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 CLCA4Q14CN2 919 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 ZRANB3Q5FWF4 1079 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 C3orf38Q5JPI3 329 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 PCID2Q5JVF3 399 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 FNBP1LQ5T0N5 605 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 LRRC8BQ6P9F7 803 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 AFTPHQ6ULP2 937 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 CLEC14AQ86T13 490 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 PIM3Q86V86 326 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 BEND7Q8N7W2 519 aaPredicted RBP15.83■□□□□ 0.12
TRIM28-213ENST00000598355 CPT1BQ92523 772 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 TMEM159Q96B96 161 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 SLC46A1Q96NT5 459 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.83■□□□□ 0.12
TRIM28-213ENST00000598355 SEMA6CQ9H3T2 930 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 FAM96AQ9H5X1 160 aa15.83■□□□□ 0.12
TRIM28-213ENST00000598355 MRM3Q9HC36 420 aaKnown RBP15.83■□□□□ 0.12
TRIM28-213ENST00000598355 TRBV23OR9-2A0A075B6M9 112 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 IGHV5-10-1A0A0J9YXX1 117 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 GOLGA6L10A0A0M3HER8 536 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 C17orf113A0A1B0GUU1 675 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 CCDC78A2IDD5 438 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 OR51F1A6NGY5 319 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 PLD2O14939 933 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 HGSO14964 777 aaPredicted RBP15.82■□□□□ 0.12
TRIM28-213ENST00000598355 DUX1O43812 170 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 ITGA2BP08514 1039 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 GSTM1P09488 218 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 RPL10P27635 214 aaKnown RBP15.82■□□□□ 0.12
TRIM28-213ENST00000598355 MAGEA3P43357 314 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 DRG2P55039 364 aaKnown RBP15.82■□□□□ 0.12
TRIM28-213ENST00000598355 GNG11P61952 73 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 GSTM4Q03013 218 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 GPS1Q13098 491 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 BIRC2Q13490 618 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 TRA2AQ13595 282 aaKnown RBP eCLIP15.82■□□□□ 0.12
TRIM28-213ENST00000598355 KCTD19Q17RG1 926 aaPredicted RBP15.82■□□□□ 0.12
TRIM28-213ENST00000598355 AMZ1Q400G9 498 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 WDR74Q6RFH5 385 aaPredicted RBP15.82■□□□□ 0.12
TRIM28-213ENST00000598355 TMEM26Q6ZUK4 368 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 DET1Q7L5Y6 550 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 ZNF761Q86XN6 746 aaPredicted RBP15.82■□□□□ 0.12
TRIM28-213ENST00000598355 CREG2Q8IUH2 290 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 RBM12BQ8IXT5 1001 aaKnown RBP15.82■□□□□ 0.12
TRIM28-213ENST00000598355 PPHLN1Q8NEY8 458 aaKnown RBP15.82■□□□□ 0.12
TRIM28-213ENST00000598355 HM13Q8TCT9 377 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 NAT14Q8WUY8 206 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 HDAC10Q969S8 669 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 DCUN1D1Q96GG9 259 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 ZNF578Q96N58 590 aaPredicted RBP15.82■□□□□ 0.12
TRIM28-213ENST00000598355 SLC38A3Q99624 504 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 KIFC1Q9BW19 673 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 STRADBQ9C0K7 418 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 EPB41L5Q9HCM4 733 aa15.82■□□□□ 0.12
TRIM28-213ENST00000598355 SLC40A1Q9NP59 571 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms