RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 GDAP1Q8TB36 358 aa19.2■□□□□ 0.66
PRKCSH-216ENST00000592445 CD180Q99467 661 aa19.2■□□□□ 0.66
PRKCSH-216ENST00000592445 IP6K2Q9UHH9 426 aa19.2■□□□□ 0.66
PRKCSH-216ENST00000592445 GJC1P36383 396 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 VAV2P52735 878 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 KLHL30Q0D2K2 578 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 RAPSNQ13702 412 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 DPYSL3Q14195 570 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 KHDC1Q4VXA5 237 aaKnown RBP19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 TMTC4Q5T4D3 741 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 CCDC183Q5T5S1 534 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 ZNF517Q6ZMY9 492 aaPredicted RBP19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 MED25Q71SY5 747 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 APTXQ7Z2E3 356 aaKnown RBP19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 TMC3Q7Z5M5 1100 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 IQCKQ8N0W5 287 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 NIPA2Q8N8Q9 360 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 SLC38A9Q8NBW4 561 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 OR8K5Q8NH50 307 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 SNRNP40Q96DI7 357 aaKnown RBP19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 TTC25Q96NG3 672 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 MAGEE1Q9HCI5 957 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 HRASLS2Q9NWW9 162 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 NFKBIL1Q9UBC1 381 aaPredicted RBP19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 ANAPC7Q9UJX3 599 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 TCFL5Q9UL49 500 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 ZNF711Q9Y462 761 aa19.19■□□□□ 0.66
PRKCSH-216ENST00000592445 MEN1O00255 615 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 CBX6O95503 412 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 RAB40ALP0C0E4 278 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 BPIP17213 487 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 RRADP55042 308 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 ITGA1P56199 1179 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 TMEM115Q12893 351 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 ELOAQ14241 798 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 RPE65Q16518 533 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 HADHQ16836 314 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 ZRANB3Q5FWF4 1079 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 FAM69BQ5VUD6 431 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 ARMC6Q6NXE6 501 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 C11orf96Q7Z7L8 435 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 AMZ2Q86W34 360 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 TMEM102Q8N9M5 508 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 KCTD6Q8NC69 237 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 FAM71BQ8TC56 605 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 ISCUQ9H1K1 167 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 ASF1BQ9NVP2 202 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 SOHLH2Q9NX45 425 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 AIPL1Q9NZN9 384 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 PSMD13Q9UNM6 376 aa19.18■□□□□ 0.66
PRKCSH-216ENST00000592445 OR5K3A6NET4 321 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 KCNK1O00180 336 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 KCNJ13O60928 360 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 ZBTB11O95625 1053 aaPredicted RBP19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 SKILP12757 684 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 PRKCIP41743 596 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 GBE1Q04446 702 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 KYNUQ16719 465 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 PLEKHN1Q494U1 663 aaPredicted RBP19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 PLEKHS1Q5SXH7 462 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 C1QL3Q5VWW1 255 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 E4F1Q66K89 784 aaPredicted RBP19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 LCN10Q6JVE6 187 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 OOSP2Q86WS3 158 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 DSELQ8IZU8 1212 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 CISD2Q8N5K1 135 aaKnown RBP19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 GLIS1Q8NBF1 620 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 TTC13Q8NBP0 860 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 CPT1BQ92523 772 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 ZNF501Q96CX3 271 aaPredicted RBP19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 CLIP3Q96DZ5 547 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 LRFN5Q96NI6 719 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 VPS35Q96QK1 796 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 PHF12Q96QT6 1004 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 SMAD5Q99717 465 aaKnown RBP19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 NLNQ9BYT8 704 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 FANCEQ9HB96 536 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 SRPK3Q9UPE1 567 aa19.17■□□□□ 0.66
PRKCSH-216ENST00000592445 ANKUB1A6NFN9 424 aa19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 ELAVL4P26378 380 aaKnown RBP19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 ARSEP51690 589 aa19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 CDK18Q07002 472 aa19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 PCSK7Q16549 785 aa19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 ATP13A5Q4VNC0 1218 aa19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 PRAMEF17Q5VTA0 474 aa19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 BRSK1Q8TDC3 778 aa19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 HDAC11Q96DB2 347 aa19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 SGSM3Q96HU1 749 aa19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 ZNF830Q96NB3 372 aaPredicted RBP19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 TRIB3Q96RU7 358 aa19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 ZNF670Q9BS34 389 aa19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 BPIFA1Q9NP55 256 aa19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 IMP3Q9NV31 184 aaKnown RBP19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 ANO10Q9NW15 660 aa19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 TMPRSS11EQ9UL52 423 aa19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 ANKRD17O75179 2603 aaKnown RBP19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 CSMD1Q96PZ7 3565 aa19.16■□□□□ 0.66
PRKCSH-216ENST00000592445 MYO1FO00160 1098 aa19.15■□□□□ 0.66
PRKCSH-216ENST00000592445 POP7O75817 140 aaKnown RBP19.15■□□□□ 0.66
PRKCSH-216ENST00000592445 XRCC4Q13426 336 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms