RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 RDH14Q9HBH5 336 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 SARS2Q9NP81 518 aaKnown RBP9.9□□□□□ -0.82
BRCA1-227ENST00000591849 ACSL5Q9ULC5 683 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 RIMKLBQ9ULI2 386 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 PSMD13Q9UNM6 376 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 SATB2Q9UPW6 733 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 TCAF1Q9Y4C2 921 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 ENTPD2Q9Y5L3 495 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.9□□□□□ -0.82
BRCA1-227ENST00000591849 NBEAQ8NFP9 2946 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 ITPR1Q14643 2758 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 LOC400499M0QZD8 3231 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-227ENST00000591849 OR51F1A6NGY5 319 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 QSOX1O00391 747 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 PFDN6O15212 129 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 BRINP1O60477 761 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 GOT2P00505 430 aaKnown RBP9.89□□□□□ -0.83
BRCA1-227ENST00000591849 JMJD7P0C870 316 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 XRCC1P18887 633 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-227ENST00000591849 TPSB2P20231 275 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 MGAT1P26572 445 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 CD1CP29017 333 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 FASLGP48023 281 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 CDKN1CP49918 316 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-227ENST00000591849 ARSDP51689 593 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 EIF3IQ13347 325 aaKnown RBP9.89□□□□□ -0.83
BRCA1-227ENST00000591849 NFE2L1Q14494 772 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 TPSAB1Q15661 275 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 DBN1Q16643 649 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 CYP1B1Q16678 543 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 CLPPQ16740 277 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-227ENST00000591849 BCL7AQ4VC05 210 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 SNAP47Q5SQN1 464 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 AGAP9Q5VTM2 703 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 LRRC8BQ6P9F7 803 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 ABRAXAS1Q6UWZ7 409 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 WASH2PQ6VEQ5 465 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 CERS6Q6ZMG9 384 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 LRRC69Q6ZNQ3 347 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 RAB11FIP2Q7L804 512 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 SDCCAG8Q86SQ7 713 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-227ENST00000591849 JAMLQ86YT9 394 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 KLHL7Q8IXQ5 586 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 OR4L1Q8NH43 312 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 NAT14Q8WUY8 206 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 FGF11Q92914 225 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 RUNDC3BQ96NL0 473 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 DCBLD2Q96PD2 775 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 CMKLR1Q99788 373 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 CCM2Q9BSQ5 444 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 WASH6PQ9NQA3 447 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 CHRAC1Q9NRG0 131 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 IMP3Q9NV31 184 aaKnown RBP9.89□□□□□ -0.83
BRCA1-227ENST00000591849 SCHIP1Q9P0W5 487 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-227ENST00000591849 SAMD15Q9P1V8 674 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 SLC2A6Q9UGQ3 507 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 ASIC3Q9UHC3 531 aa9.89□□□□□ -0.83
BRCA1-227ENST00000591849 IGHV1OR21-1A0A087WYE8 117 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 A6NCN8 305 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 OR52A4PA6NMU1 304 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 SRRM3A6NNA2 597 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-227ENST00000591849 A8MU76 341 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 GOLGA8MH3BSY2 632 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 IFRD1O00458 451 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-227ENST00000591849 PLD2O14939 933 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 CASC3O15234 703 aaKnown RBP9.88□□□□□ -0.83
BRCA1-227ENST00000591849 RRP8O43159 456 aaKnown RBP9.88□□□□□ -0.83
BRCA1-227ENST00000591849 NDUFS3O75489 264 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 AP2A2O94973 939 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 TNFSF15O95150 251 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 FTH1P02794 183 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 SLC35G4P0C7Q5 338 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 OR56A5P0C7T3 313 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 PRSS56P0CW18 603 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 TYRP1P17643 537 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 PAMP19021 973 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 MPSTP25325 297 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 CCKBRP32239 447 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 CSTF2P33240 577 aaKnown RBP eCLIP9.88□□□□□ -0.83
BRCA1-227ENST00000591849 SLC19A1P41440 591 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 NSG1P42857 185 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 EPHA4P54764 986 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 CRADDP78560 199 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 ITIH4Q14624 930 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 CLCA4Q14CN2 919 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 PLCL1Q15111 1095 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 KCTD19Q17RG1 926 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-227ENST00000591849 AARS2Q5JTZ9 985 aaKnown RBP9.88□□□□□ -0.83
BRCA1-227ENST00000591849 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-227ENST00000591849 PAPD7Q5XG87 772 aaKnown RBP9.88□□□□□ -0.83
BRCA1-227ENST00000591849 METRNLQ641Q3 311 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 TMEM26Q6ZUK4 368 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 ZNF438Q7Z4V0 828 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 C11orf96Q7Z7L8 435 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 B3GNT8Q7Z7M8 397 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 RBM12BQ8IXT5 1001 aaKnown RBP9.88□□□□□ -0.83
BRCA1-227ENST00000591849 PIANPQ8IYJ0 282 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 OR2L2Q8NH16 312 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 HM13Q8TCT9 377 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms