RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 ANKRD46Q86W74 232 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PGAM4Q8N0Y7 254 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 OR5T3Q8NGG3 340 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 HBEGFQ99075 208 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 HSD17B14Q9BPX1 270 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TRIM2Q9C040 744 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PLEKHA1Q9HB21 404 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 MIOSQ9NXC5 875 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 hCG_2039718K7EN88 272 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 VIPP01282 170 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CD247P20963 164 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CDH12P55289 794 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 AP1S2P56377 157 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 VBP1P61758 197 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CLCQ05315 142 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 HSPB3Q12988 150 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 E2F2Q14209 437 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SMU1Q2TAY7 513 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TNFAIP8L3Q5GJ75 292 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 UBE2J2Q8N2K1 259 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 FAM129BQ96TA1 746 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 MTRRQ9UBK8 725 aa13.14□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PSMD9O00233 223 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TLL1O43897 1013 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CCR10P46092 362 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 RPIAP49247 311 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CASP9P55211 416 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 GTF2H2Q13888 395 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 BMT2Q1RMZ1 405 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 ATP13A5Q4VNC0 1218 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 GTF2H2CQ6P1K8 395 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 OR8H1Q8NGG4 311 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 LRTOMTQ8WZ04 291 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TRMUO75648 421 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PGRP06401 933 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 FOSL2P15408 326 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 NCK1P16333 377 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 MASP1P48740 699 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 MAPK12P53778 367 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 ATXN1P54253 815 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 FASTKD3Q14CZ7 662 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 LIX1Q8N485 282 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SLC38A4Q969I6 547 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TBATAQ96M53 351 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PTPN18Q99952 460 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 KCNS3Q9BQ31 491 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CST11Q9H112 138 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 GBA3Q9H227 469 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 NUDT4Q9NZJ9 180 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 REXO2Q9Y3B8 237 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TESMINQ9Y4I5 508 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PCDHAC2Q9Y5I4 1007 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 LDOC1O95751 146 aaPredicted RBP13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 IDSP22304 550 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PPM1AP35813 382 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CPT1BQ92523 772 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SLC4A9Q96Q91 983 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TTYH1Q9H313 450 aaPredicted RBP13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CHMP1AQ9HD42 196 aaPredicted RBP13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 FBXW2Q9UKT8 454 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TELO2Q9Y4R8 837 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SLIT1O75093 1534 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 WTIPA6NIX2 430 aaPredicted RBP13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 AIREO43918 545 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PRAMEF1O95521 474 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 NDST3O95803 873 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CCNE2O96020 404 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 MMP8P22894 467 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 HNRNPH3P31942 346 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CA9Q16790 459 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SMARCD3Q6STE5 483 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 P2RY8Q86VZ1 359 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CFAP206Q8IYR0 622 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CLIP4Q8N3C7 705 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PLD5Q8N7P1 536 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 ATAD1Q8NBU5 361 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 ZNF570Q96NI8 536 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 WRAP53Q9BUR4 548 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TIMMDC1Q9NPL8 285 aa13.13□□□□□ -0.31
RAB11FIP4-210ENST00000585058 RASGRP1O95267 797 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 RHBDL3P58872 404 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 MINDY4Q4G0A6 757 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PAOXQ6QHF9 649 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 FAM92BQ6ZTR7 304 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 C11orf65Q8NCR3 313 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PMEPA1Q969W9 287 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 C7orf26Q96N11 449 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 GAL3ST1Q99999 423 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 MUC13Q9H3R2 512 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 MGAT4AQ9UM21 535 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TCRBV7S2A1N4TA0A589 114 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CCL16O15467 120 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 RNASEH2AO75792 299 aaKnown RBP13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SLURP2P0DP57 97 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 OGNP20774 298 aaKnown RBP13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TUSC3Q13454 348 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 MED27Q6P2C8 311 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 LCLAT1Q6UWP7 414 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CEP68Q76N32 757 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 RASGEF1CQ8N431 466 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms