RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 BEND7Q8N7W2 519 aaPredicted RBP16.99■□□□□ 0.31
SMG6-212ENST00000573153 FAM71DQ8N9W8 422 aa16.99■□□□□ 0.31
SMG6-212ENST00000573153 RSC1A1Q92681 617 aa16.99■□□□□ 0.31
SMG6-212ENST00000573153 NKD1Q969G9 470 aa16.99■□□□□ 0.31
SMG6-212ENST00000573153 SH3KBP1Q96B97 665 aa16.99■□□□□ 0.31
SMG6-212ENST00000573153 WBP1Q96G27 269 aa16.99■□□□□ 0.31
SMG6-212ENST00000573153 TAAR9Q96RI9 348 aa16.99■□□□□ 0.31
SMG6-212ENST00000573153 TBL1YQ9BQ87 522 aa16.99■□□□□ 0.31
SMG6-212ENST00000573153 ZCCHC2Q9C0B9 1178 aaKnown RBP16.99■□□□□ 0.31
SMG6-212ENST00000573153 APMAPQ9HDC9 416 aa16.99■□□□□ 0.31
SMG6-212ENST00000573153 POT1Q9NUX5 634 aa16.99■□□□□ 0.31
SMG6-212ENST00000573153 EFCAB7A8K855 629 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 CCL22O00626 93 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 STX7O15400 261 aaKnown RBP16.98■□□□□ 0.31
SMG6-212ENST00000573153 POP7O75817 140 aaKnown RBP16.98■□□□□ 0.31
SMG6-212ENST00000573153 SRP72O76094 671 aaKnown RBP16.98■□□□□ 0.31
SMG6-212ENST00000573153 PTMAP06454 111 aaKnown RBP16.98■□□□□ 0.31
SMG6-212ENST00000573153 LEPRP48357 1165 aaKnown RBP16.98■□□□□ 0.31
SMG6-212ENST00000573153 MC2RQ01718 297 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 BIRC2Q13490 618 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 GPR18Q14330 331 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 NFE2L1Q14494 772 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 OASLQ15646 514 aaKnown RBP16.98■□□□□ 0.31
SMG6-212ENST00000573153 P3H1Q32P28 736 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 LINC00303Q3SY05 128 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 ANKS6Q68DC2 871 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 TMEM220Q6QAJ8 160 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 CCDC81Q6ZN84 652 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 ARHGEF18Q6ZSZ5 1173 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 TRAPPC5Q8IUR0 188 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 ZNF843Q8N446 348 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 ZNF398Q8TD17 642 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 ATG4AQ8WYN0 398 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 NCSTNQ92542 709 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 LRRC45Q96CN5 670 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.98■□□□□ 0.31
SMG6-212ENST00000573153 EPB41L1Q9H4G0 881 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 STN1Q9H668 368 aaKnown RBP16.98■□□□□ 0.31
SMG6-212ENST00000573153 PCDHGA4Q9Y5G9 962 aa16.98■□□□□ 0.31
SMG6-212ENST00000573153 DNMT3AQ9Y6K1 912 aaPredicted RBP16.98■□□□□ 0.31
SMG6-212ENST00000573153 IGLV3-16A0A075B6K0 115 aa16.97■□□□□ 0.31
SMG6-212ENST00000573153 TRBV5-4A0A0C4DH59 114 aa16.97■□□□□ 0.31
SMG6-212ENST00000573153 OR2AG2A6NM03 316 aa16.97■□□□□ 0.31
SMG6-212ENST00000573153 A8MU76 341 aa16.97■□□□□ 0.31
SMG6-212ENST00000573153 CRTAMO95727 393 aa16.97■□□□□ 0.31
SMG6-212ENST00000573153 CCDC175P0C221 793 aa16.97■□□□□ 0.31
SMG6-212ENST00000573153 PRSS56P0CW18 603 aa16.97■□□□□ 0.31
SMG6-212ENST00000573153 IDSP22304 550 aa16.97■□□□□ 0.31
SMG6-212ENST00000573153 STIP1P31948 543 aaKnown RBP16.97■□□□□ 0.31
SMG6-212ENST00000573153 CDKN1CP49918 316 aaPredicted RBP16.97■□□□□ 0.31
SMG6-212ENST00000573153 PPP1CAP62136 330 aa16.97■□□□□ 0.31
SMG6-212ENST00000573153 SIX1Q15475 284 aaPredicted RBP16.97■□□□□ 0.31
SMG6-212ENST00000573153 BCL7AQ4VC05 210 aa16.97■□□□□ 0.31
SMG6-212ENST00000573153 SEL1L2Q5TEA6 688 aa16.97■□□□□ 0.31
SMG6-212ENST00000573153 TIPARPQ7Z3E1 657 aaKnown RBP16.97■□□□□ 0.31
SMG6-212ENST00000573153 SLC13A5Q86YT5 568 aaPredicted RBP16.97■□□□□ 0.31
SMG6-212ENST00000573153 LILRA3Q8N6C8 439 aaPredicted RBP16.97■□□□□ 0.31
SMG6-212ENST00000573153 ZNF514Q96K75 400 aaPredicted RBP16.97■□□□□ 0.31
SMG6-212ENST00000573153 LINC00615Q96LM1 132 aaPredicted RBP16.97■□□□□ 0.31
SMG6-212ENST00000573153 C9orf72Q96LT7 481 aa16.97■□□□□ 0.31
SMG6-212ENST00000573153 TMEM121Q9BTD3 319 aa16.97■□□□□ 0.31
SMG6-212ENST00000573153 LRRC40Q9H9A6 602 aa16.97■□□□□ 0.31
SMG6-212ENST00000573153 SEMA5BQ9P283 1151 aa16.97■□□□□ 0.31
SMG6-212ENST00000573153 PDZK1P1A8MUH7 402 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 H7C0S8 307 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 PSMD3O43242 534 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 LIASO43766 372 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 KIF1CO43896 1103 aaKnown RBP16.96■□□□□ 0.31
SMG6-212ENST00000573153 AP2A1O95782 977 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 TYRP1P17643 537 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 CSTF2P33240 577 aaKnown RBP eCLIP16.96■□□□□ 0.31
SMG6-212ENST00000573153 MAPK9P45984 424 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 CAPZBP47756 277 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 CCZ1BP86790 482 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 CCZ1P86791 482 aaPredicted RBP16.96■□□□□ 0.31
SMG6-212ENST00000573153 GTF2H3Q13889 308 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 RPE65Q16518 533 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 SNAP47Q5SQN1 464 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 METRNLQ641Q3 311 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 AMZ2Q86W34 360 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 GDAP1Q8TB36 358 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 SGF29Q96ES7 293 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 AHCYL2Q96HN2 611 aaKnown RBP16.96■□□□□ 0.31
SMG6-212ENST00000573153 DNAJC1Q96KC8 554 aaKnown RBP16.96■□□□□ 0.31
SMG6-212ENST00000573153 FBXO8Q9NRD0 319 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 SLC39A1Q9NY26 324 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 PILRAQ9UKJ1 303 aa16.96■□□□□ 0.31
SMG6-212ENST00000573153 KLHL33A6NCF5 533 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 ERI2A8K979 691 aaKnown RBP16.95■□□□□ 0.3
SMG6-212ENST00000573153 STMND1H3BQB6 276 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 UBXN7O94888 489 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 DLGAP3O95886 979 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 VIPP01282 170 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 VCLP18206 1134 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 HADHAP40939 763 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 RPS6KA1Q15418 735 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 DUS1LQ6P1R4 473 aaKnown RBP16.95■□□□□ 0.3
SMG6-212ENST00000573153 PRSS42Q7Z5A4 293 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 NXPE1Q8N323 547 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 EXD3Q8N9H8 876 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms