RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 SARGQ9BW04 601 aa6.42□□□□□ -1.38
HERPUD1-217ENST00000569429 AMBRA1Q9C0C7 1298 aa6.42□□□□□ -1.38
HERPUD1-217ENST00000569429 SLC7A5P2Q9GIP4 190 aa6.42□□□□□ -1.38
HERPUD1-217ENST00000569429 MMRN2Q9H8L6 949 aa6.42□□□□□ -1.38
HERPUD1-217ENST00000569429 RMI1Q9H9A7 625 aa6.42□□□□□ -1.38
HERPUD1-217ENST00000569429 DMRT3Q9NQL9 472 aa6.42□□□□□ -1.38
HERPUD1-217ENST00000569429 TMEM51Q9NW97 253 aa6.42□□□□□ -1.38
HERPUD1-217ENST00000569429 GOLGA6AQ9NYA3 693 aa6.42□□□□□ -1.38
HERPUD1-217ENST00000569429 PLA2G3Q9NZ20 509 aa6.42□□□□□ -1.38
HERPUD1-217ENST00000569429 VPS18Q9P253 973 aa6.42□□□□□ -1.38
HERPUD1-217ENST00000569429 LHX3Q9UBR4 397 aa6.42□□□□□ -1.38
HERPUD1-217ENST00000569429 B4GALT6Q9UBX8 382 aa6.42□□□□□ -1.38
HERPUD1-217ENST00000569429 NDOR1Q9UHB4 597 aa6.42□□□□□ -1.38
HERPUD1-217ENST00000569429 GPN3Q9UHW5 284 aaPredicted RBP6.42□□□□□ -1.38
HERPUD1-217ENST00000569429 MKL2Q9ULH7 1088 aa6.42□□□□□ -1.38
HERPUD1-217ENST00000569429 FHOD1Q9Y613 1164 aa6.42□□□□□ -1.38
HERPUD1-217ENST00000569429 UBA6A0AVT1 1052 aaPredicted RBP6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 TRIM64A6NGJ6 449 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 TRIM64BA6NI03 449 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 RNF225M0QZC1 329 aaPredicted RBP6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 PDXKO00764 312 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 RAMP2O60895 175 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 HEXIM1O94992 359 aaKnown RBP6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 LCA5LO95447 670 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 PRAMEF1O95521 474 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 ERBB2P04626 1255 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 PYGLP06737 847 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 TBXAS1P24557 533 aaPredicted RBP6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 SERPINA4P29622 427 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 SOX11P35716 441 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 PEX19P40855 299 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 KIR2DL3P43628 341 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 CHRNA4P43681 627 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 CSNK1DP48730 415 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 MXI1P50539 228 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 AMPD3Q01432 767 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 PMP22Q01453 160 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 CYTH1Q15438 398 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 MEA1Q16626 185 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 DNTTIP2Q5QJE6 756 aaKnown RBP6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 CATSPEREQ5SY80 951 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 ATG9BQ674R7 924 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 KLHL35Q6PF15 583 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 TMEM270Q6UE05 265 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 KIRREL2Q6UWL6 708 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 TRIM72Q6ZMU5 477 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 Q6ZVL8 140 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 USP45Q70EL2 814 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 HSD11B1LQ7Z5J1 315 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 C11orf96Q7Z7L8 435 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 NLRP14Q86W24 1093 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 PAQR7Q86WK9 346 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 PHYKPLQ8IUZ5 450 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 CHERPQ8IWX8 916 aaKnown RBP6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 GHDCQ8N2G8 530 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 OR1L3Q8NH93 324 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 SUN3Q8TAQ9 357 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 ROBO4Q8WZ75 1007 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 RND1Q92730 232 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 SNX21Q969T3 373 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 PGAP3Q96FM1 320 aaPredicted RBP6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 INTS4Q96HW7 963 aaKnown RBP6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 NPY6RQ99463 290 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.41□□□□□ -1.382e-8■■■□□ 18.7
HERPUD1-217ENST00000569429 KCTD10Q9H3F6 313 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 CUEDC2Q9H467 287 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 ATP13A3Q9H7F0 1226 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 SLC39A2Q9NP94 309 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 TMEM248Q9NWD8 314 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 APEX2Q9UBZ4 518 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 SERTAD3Q9UJW9 196 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 MRPS2Q9Y399 296 aaKnown RBP6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 PRKAB1Q9Y478 270 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 CMYA5Q8N3K9 4069 aa6.41□□□□□ -1.38
HERPUD1-217ENST00000569429 E7EQ34 232 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 NPIPA5E9PKD4 350 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 TRAFD1O14545 582 aaPredicted RBP6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 ZNF749O43361 778 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 ASNA1O43681 348 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 ASMTLO95671 621 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 NEFLP07196 543 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 CBSLP0DN79 551 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 KRT13P13646 458 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 VIPR1P32241 457 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 CBSP35520 551 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 FOXL2P58012 376 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 ALDH6A1Q02252 535 aaKnown RBP6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 DMTNQ08495 405 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 OLIG2Q13516 323 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 LBRQ14739 615 aaKnown RBP6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 DAZAP2Q15038 168 aaPredicted RBP6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 TUBB8Q3ZCM7 444 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 AGAP9Q5VTM2 703 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 ABRAXAS1Q6UWZ7 409 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 TMEM151BQ8IW70 566 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 EXD1Q8NHP7 514 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 PROKR1Q8TCW9 393 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 PSMF1Q92530 271 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 NT5C3BQ969T7 300 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 PIP5K1AQ99755 562 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms