RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 CA5AP35218 305 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 SERPINB6P35237 376 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 KLK7P49862 253 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 JAM2P57087 298 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 MAMLD1Q13495 774 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 MYBPC3Q14896 1274 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 CRB2Q5IJ48 1285 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 PRAMEF17Q5VTA0 474 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 AGAP9Q5VTM2 703 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 ARMC6Q6NXE6 501 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 WASH2PQ6VEQ5 465 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 ADGRG6Q86SQ4 1221 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 FJX1Q86VR8 437 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 KCNMB4Q86W47 210 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 PSTKQ8IV42 348 aaKnown RBP7.16□□□□□ -1.26
VPS4A-203ENST00000564399 SYTL1Q8IYJ3 562 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 DSELQ8IZU8 1212 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 GALNT16Q8N428 558 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 D2HGDHQ8N465 521 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 CLEC1AQ8NC01 280 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 INPP5DQ92835 1189 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 ZNF501Q96CX3 271 aaPredicted RBP7.16□□□□□ -1.26
VPS4A-203ENST00000564399 LURAP1Q96LR2 239 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 FER1L6-AS2Q96M78 137 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 LRFN5Q96NI6 719 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 CD180Q99467 661 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 AGPAT1Q99943 283 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 TIMM29Q9BSF4 260 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 TDRD1Q9BXT4 1180 aaKnown RBP7.16□□□□□ -1.26
VPS4A-203ENST00000564399 FANCEQ9HB96 536 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 PCDH9Q9HC56 1237 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 PARVAQ9NVD7 372 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 DTLQ9NZJ0 730 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 PADI2Q9Y2J8 665 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 PCDHGA10Q9Y5H3 936 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 A0A1B0GUH1 482 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 TMCO5BA8MYB1 307 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 EPHB6O15197 1021 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 ATMINO43313 823 aaPredicted RBP7.15□□□□□ -1.26
VPS4A-203ENST00000564399 GADD45BO75293 160 aaPredicted RBP7.15□□□□□ -1.26
VPS4A-203ENST00000564399 LCA5LO95447 670 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 PRLP01236 227 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 IGHEP01854 428 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 SLC4A1P02730 911 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 CYP2A7P20853 494 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 CES1P23141 567 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 RPL26P61254 145 aaKnown RBP7.15□□□□□ -1.26
VPS4A-203ENST00000564399 IHHQ14623 411 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 SMTNL2Q2TAL5 461 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 PTCHD3Q3KNS1 767 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 KRTAP21-3Q3LHN1 58 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 ANO6Q4KMQ2 910 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 TCP11X2Q5H9J9 407 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 DCAF10Q5QP82 559 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 FKBP15Q5T1M5 1219 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 ACAD10Q6JQN1 1059 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 FBXO38Q6PIJ6 1188 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 FAM198BQ6UWH4 519 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 IGFL3Q6UXB1 125 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 Q6ZS92 163 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 POLNQ7Z5Q5 900 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 MRGPREQ86SM8 312 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 CUZD1Q86UP6 607 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 OOSP2Q86WS3 158 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 TRAPPC5Q8IUR0 188 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 TEX26Q8N6G2 289 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 GPR150Q8NGU9 434 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 GDAP1Q8TB36 358 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 GRHL3Q8TE85 626 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 HSPH1Q92598 858 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 GLYATL1Q969I3 302 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 TTC25Q96NG3 672 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 IP6K3Q96PC2 410 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 LYSMD1Q96S90 227 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 BARD1Q99728 777 aaKnown RBP7.15□□□□□ -1.26
VPS4A-203ENST00000564399 ZSCAN5AQ9BUG6 496 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 TLR10Q9BXR5 811 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 ZNF552Q9H707 407 aaPredicted RBP7.15□□□□□ -1.26
VPS4A-203ENST00000564399 ACTR5Q9H9F9 607 aaPredicted RBP7.15□□□□□ -1.26
VPS4A-203ENST00000564399 LATS2Q9NRM7 1088 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 SAMSN1Q9NSI8 373 aaKnown RBP7.15□□□□□ -1.26
VPS4A-203ENST00000564399 HAUS2Q9NVX0 235 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 RBM22Q9NW64 420 aaKnown RBP eCLIP7.15□□□□□ -1.26
VPS4A-203ENST00000564399 HRASLS2Q9NWW9 162 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 PSMD13Q9UNM6 376 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 RPL26L1Q9UNX3 145 aaKnown RBP7.15□□□□□ -1.26
VPS4A-203ENST00000564399 WDR37Q9Y2I8 494 aa7.15□□□□□ -1.26
VPS4A-203ENST00000564399 PCSK5Q92824 1860 aa7.15□□□□□ -1.27
VPS4A-203ENST00000564399 ANKHD1Q8IWZ3 2542 aaKnown RBP7.15□□□□□ -1.27
VPS4A-203ENST00000564399 NF1P21359 2839 aa7.14□□□□□ -1.27
VPS4A-203ENST00000564399 TACC2O95359 2948 aa7.14□□□□□ -1.27
VPS4A-203ENST00000564399 OR5K3A6NET4 321 aa7.14□□□□□ -1.27
VPS4A-203ENST00000564399 TMEM191CA6NGB0 347 aa7.14□□□□□ -1.27
VPS4A-203ENST00000564399 ANKRD66B4E2M5 251 aa7.14□□□□□ -1.27
VPS4A-203ENST00000564399 TMEM150CB9EJG8 249 aa7.14□□□□□ -1.27
VPS4A-203ENST00000564399 VEGFDO43915 354 aa7.14□□□□□ -1.27
VPS4A-203ENST00000564399 DIAPH2O60879 1101 aa7.14□□□□□ -1.27
VPS4A-203ENST00000564399 CAPN1P07384 714 aa7.14□□□□□ -1.27
VPS4A-203ENST00000564399 TPM2P07951 284 aa7.14□□□□□ -1.27
VPS4A-203ENST00000564399 EDN3P14138 238 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms