RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 FECHP22830 423 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 OTX2P32243 289 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 HSPA9P38646 679 aaKnown RBP7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 HADHAP40939 763 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 KCNK10P57789 538 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 MAXP61244 160 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 HSD11B2P80365 405 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 FMO1Q01740 532 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 CDSNQ15517 529 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 VWA2Q5GFL6 755 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 ARMC12Q5T9G4 340 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 AGAP9Q5VTM2 703 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 SCYL2Q6P3W7 929 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 WASH2PQ6VEQ5 465 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 TRIM72Q6ZMU5 477 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 C11orf96Q7Z7L8 435 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 ADGRG6Q86SQ4 1221 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 ZNF547Q8IVP9 402 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 TRIM48Q8IWZ4 208 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 RBM12BQ8IXT5 1001 aaKnown RBP7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 SLC30A5Q8TAD4 765 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 SLC20A1Q8WUM9 679 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 NANOS1Q8WY41 292 aaKnown RBP7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 TM9SF4Q92544 642 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 HDAC11Q96DB2 347 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 CCDC34Q96HJ3 373 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 FER1L6-AS2Q96M78 137 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 IP6K3Q96PC2 410 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 CD180Q99467 661 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 TRIM56Q9BRZ2 755 aaKnown RBP7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 ARFGAP3Q9NP61 516 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 GPATCH2LQ9NWQ4 482 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 BTRCQ9Y297 605 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 WDR37Q9Y2I8 494 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 FHOD1Q9Y613 1164 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 EEF2KO00418 725 aaKnown RBP7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 KLHL41O60662 606 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 CNOT3O75175 753 aaKnown RBP7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 CLDN7O95471 211 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 PRLP01236 227 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 UNGP13051 313 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 CD99P14209 185 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 ZNF7P17097 686 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 IL4RP24394 825 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 RPL10P27635 214 aaKnown RBP7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 SPINT3P49223 89 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 ZNF143P52747 638 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 RPL7AP62424 266 aaKnown RBP7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 ADORA2A-AS1P86434 159 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 OGDHQ02218 1023 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 SSPNQ14714 243 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 ZNF169Q14929 603 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 SEPT7Q16181 437 aaKnown RBP7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 PTCHD3Q3KNS1 767 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 PLA2G4EQ3MJ16 856 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 RALGPS1Q5JS13 557 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 B3GNTL1Q67FW5 361 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 FBXO38Q6PIJ6 1188 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 THSD4Q6ZMP0 1018 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 CYP4V2Q6ZWL3 525 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 PPP1R32Q7Z5V6 425 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 CLEC1AQ8NC01 280 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 OR1L3Q8NH93 324 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 CPT1BQ92523 772 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 PPM1MQ96MI6 270 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 LYSMD1Q96S90 227 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 KCTD15Q96SI1 283 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 TIMM29Q9BSF4 260 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 OR2AG1Q9H205 316 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 MCCC2Q9HCC0 563 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 GDPD2Q9HCC8 539 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 TRIM39Q9HCM9 518 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 P4HTMQ9NXG6 502 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 AP4E1Q9UPM8 1137 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 DNAJC16Q9Y2G8 782 aa7.53□□□□□ -1.2
HERPUD1-206ENST00000563343 GTF3C1Q12789 2109 aa7.52□□□□□ -1.2
HERPUD1-206ENST00000563343 FAM221AA4D161 298 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 OR5K3A6NET4 321 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 SIGLEC16A6NMB1 481 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 GPR89AB7ZAQ6 455 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 KMOO15229 486 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 DDX3YO15523 660 aaKnown RBP7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 MAFKO60675 156 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 ZBTB11O95625 1053 aaPredicted RBP7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 MSL3P1P0C860 447 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 GPR89BP0CG08 455 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 CA7P43166 264 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 DRG2P55039 364 aaKnown RBP7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 FOXL2P58012 376 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 CDR2Q01850 454 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 TLE4Q04727 773 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 CDC16Q13042 620 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 PLCL1Q15111 1095 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 INSCQ1MX18 579 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 KHDC1Q4VXA5 237 aaKnown RBP7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 DNTTIP2Q5QJE6 756 aaKnown RBP7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 FCRL6Q6DN72 434 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 PLEKHA7Q6IQ23 1121 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 RPUSD3Q6P087 351 aaKnown RBP7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 XKRXQ6PP77 449 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms