RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 SQSTM1Q13501 440 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 DBN1Q16643 649 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 ZNF658BQ4V348 819 aaPredicted RBP13.42□□□□□ -0.26
SNX6-203ENST00000555416 BCL7AQ4VC05 210 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 TSTD2Q5T7W7 516 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 AGAP9Q5VTM2 703 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 WASH2PQ6VEQ5 465 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 ZNF534Q76KX8 674 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 SLC9B2Q86UD5 537 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 PIM3Q86V86 326 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 FBXO39Q8N4B4 442 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 CLDN19Q8N6F1 224 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 GPR150Q8NGU9 434 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 WDR36Q8NI36 951 aaKnown RBP13.42□□□□□ -0.26
SNX6-203ENST00000555416 HNRNPLLQ8WVV9 542 aaKnown RBP13.42□□□□□ -0.26
SNX6-203ENST00000555416 JPH3Q8WXH2 748 aaPredicted RBP13.42□□□□□ -0.26
SNX6-203ENST00000555416 FGF11Q92914 225 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 HDAC10Q969S8 669 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 LRRC45Q96CN5 670 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 CCDC74BQ96LY2 380 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 SLC38A3Q99624 504 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 ZCCHC2Q9C0B9 1178 aaKnown RBP13.42□□□□□ -0.26
SNX6-203ENST00000555416 WASH6PQ9NQA3 447 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 SNX12Q9UMY4 172 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 NEU2Q9Y3R4 380 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 LOXL2Q9Y4K0 774 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 PCDHGA8Q9Y5G5 932 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 CFAP20Q9Y6A4 193 aaKnown RBP13.42□□□□□ -0.26
SNX6-203ENST00000555416 PRSS21Q9Y6M0 314 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 ZFYVE26Q68DK2 2539 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 A0A087WV48 116 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 OR5K4A6NMS3 321 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 CCL4P13236 92 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 IDSP22304 550 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 MSNP26038 577 aaKnown RBP13.41□□□□□ -0.26
SNX6-203ENST00000555416 MAPK9P45984 424 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 LIMK2P53671 638 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 SESN2P58004 480 aaPredicted RBP13.41□□□□□ -0.26
SNX6-203ENST00000555416 CCDC173Q0VFZ6 552 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 CYP1B1Q16678 543 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 ANKRD22Q5VYY1 191 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 METRNLQ641Q3 311 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 IGF2-ASQ6U949 168 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 TAS2R42Q7RTR8 314 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 PMEPA1Q969W9 287 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 MAGOHBQ96A72 148 aaKnown RBP13.41□□□□□ -0.26
SNX6-203ENST00000555416 ULK4Q96C45 1275 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 NAF1Q96HR8 494 aaKnown RBP13.41□□□□□ -0.26
SNX6-203ENST00000555416 RANBP9Q96S59 729 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 COPS8Q99627 209 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 EIF2B3Q9NR50 452 aaKnown RBP13.41□□□□□ -0.26
SNX6-203ENST00000555416 ZDHHC3Q9NYG2 299 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 PISDQ9UG56 409 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 TCAF1Q9Y4C2 921 aa13.41□□□□□ -0.26
SNX6-203ENST00000555416 DNMT3AQ9Y6K1 912 aaPredicted RBP13.41□□□□□ -0.26
SNX6-203ENST00000555416 HEATR9A2RTY3 570 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 MGAT4DA6NG13 374 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 PGRMC1O00264 195 aaKnown RBP13.4□□□□□ -0.26
SNX6-203ENST00000555416 KIF5CO60282 957 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 GOT2P00505 430 aaKnown RBP13.4□□□□□ -0.26
SNX6-203ENST00000555416 VIPP01282 170 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 KRT14P02533 472 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 THRAP10827 490 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 ATP1B2P14415 290 aaPredicted RBP13.4□□□□□ -0.26
SNX6-203ENST00000555416 SLC2A4P14672 509 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 TYRP1P17643 537 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 ADRA1DP25100 572 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 COILP38432 576 aaPredicted RBP13.4□□□□□ -0.26
SNX6-203ENST00000555416 PRLHRP49683 370 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 ERVPABLB-1P60509 514 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 GPLD1P80108 840 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 ACVR1Q04771 509 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 CACNG1Q06432 222 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 GPS1Q13098 491 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 GPR18Q14330 331 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 SEMA3AQ14563 771 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 KCNJ11Q14654 390 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 RPE65Q16518 533 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 COL28A1Q2UY09 1125 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 GPR33Q49SQ1 333 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 DUS1LQ6P1R4 473 aaKnown RBP13.4□□□□□ -0.26
SNX6-203ENST00000555416 TMEM26Q6ZUK4 368 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 OR4D9Q8NGE8 314 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 OR2L2Q8NH16 312 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 OR10G6Q8NH81 332 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 NCSTNQ92542 709 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 DCUN1D1Q96GG9 259 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 ZNF578Q96N58 590 aaPredicted RBP13.4□□□□□ -0.26
SNX6-203ENST00000555416 INSM2Q96T92 566 aaPredicted RBP13.4□□□□□ -0.26
SNX6-203ENST00000555416 STRADBQ9C0K7 418 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 WWP1Q9H0M0 922 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 SLC40A1Q9NP59 571 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 CHRAC1Q9NRG0 131 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 HOMER3Q9NSC5 361 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 PDP2Q9P2J9 529 aa13.4□□□□□ -0.26
SNX6-203ENST00000555416 ADAMTS20P59510 1910 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 LILRA5A6NI73 299 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 OR1I1O60431 355 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 AVILO75366 819 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 TMEM63AO94886 807 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms