RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 RNF112Q9ULX5 631 aa11.12□□□□□ -0.63
CACNB3-224ENST00000552812 USH1CQ9Y6N9 552 aa11.12□□□□□ -0.63
CACNB3-224ENST00000552812 PIKFYVEQ9Y2I7 2098 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 UNC80Q8N2C7 3258 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 ATXN2Q99700 1313 aaKnown RBP11.11□□□□□ -0.63
CACNB3-224ENST00000552812 A0A1W2PP55 124 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 SHISA7A6NL88 538 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 LOC730098B7Z3J9 87 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 BTN3A1O00481 513 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 MAN2B1O00754 1011 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 RNASEH2AO75792 299 aaKnown RBP11.11□□□□□ -0.63
CACNB3-224ENST00000552812 TM7SF2O76062 418 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 HSPA4LO95757 839 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 SOD1P00441 154 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 FTH1P02794 183 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 MTHFD2P13995 350 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 HK2P52789 917 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 NAA20P61599 178 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 GALNT1Q10472 559 aaPredicted RBP11.11□□□□□ -0.63
CACNB3-224ENST00000552812 SFSWAPQ12872 951 aaKnown RBP11.11□□□□□ -0.63
CACNB3-224ENST00000552812 TSNQ15631 228 aaKnown RBP11.11□□□□□ -0.63
CACNB3-224ENST00000552812 TTC31Q49AM3 519 aaPredicted RBP11.11□□□□□ -0.63
CACNB3-224ENST00000552812 ADAMTSL2Q86TH1 951 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 TMPRSS6Q8IU80 811 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 MYO1HQ8N1T3 1032 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 FUBP1Q96AE4 644 aaKnown RBP11.11□□□□□ -0.63
CACNB3-224ENST00000552812 ERLEC1Q96DZ1 483 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 TRMOQ9BU70 441 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 ZNF395Q9H8N7 513 aaPredicted RBP11.11□□□□□ -0.63
CACNB3-224ENST00000552812 FBXL12Q9NXK8 326 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 KCNK4Q9NYG8 393 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 HAO1Q9UJM8 370 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 FZD4Q9ULV1 537 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 DUSP12Q9UNI6 340 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 COQ6Q9Y2Z9 468 aa11.11□□□□□ -0.63
CACNB3-224ENST00000552812 NPEPPSL1A6NEC2 478 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 NEMP2A6NFY4 417 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 PLRG1O43660 514 aaKnown RBP11.1□□□□□ -0.63
CACNB3-224ENST00000552812 KLK8O60259 260 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 LYPLA1O75608 230 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-224ENST00000552812 IMPDH1P20839 514 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 AOAHP28039 575 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 ARRB2P32121 409 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 GPR1P46091 355 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 PRLHRP49683 370 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 HERVK_113P63132 956 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 GBX1Q14549 363 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 CFAP157Q5JU67 520 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 RAET1GQ6H3X3 334 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 KIAA1161Q6NSJ0 714 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 USP30Q70CQ3 517 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 RAB44Q7Z6P3 723 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-224ENST00000552812 YTHDF3Q7Z739 585 aaKnown RBP11.1□□□□□ -0.63
CACNB3-224ENST00000552812 KBTBD6Q86V97 674 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 CACUL1Q86Y37 369 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 KIRREL3Q8IZU9 778 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 DEFB123Q8N688 67 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 RPLP0P6Q8NHW5 317 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 RFWD2Q8NHY2 731 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 TMEM237Q96Q45 408 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 ERVK-6Q9BXR3 956 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 ILKAPQ9H0C8 392 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-224ENST00000552812 STN1Q9H668 368 aaKnown RBP11.1□□□□□ -0.63
CACNB3-224ENST00000552812 SERGEFQ9UGK8 458 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 DNAJC16Q9Y2G8 782 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-224ENST00000552812 RAP2CQ9Y3L5 183 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 MYO10Q9HD67 2058 aa11.1□□□□□ -0.63
CACNB3-224ENST00000552812 A0A0G2JND7 137 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 STX16-NPEPL1H3BU86 382 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 CDC7O00311 574 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 STX16O14662 325 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 SGTAO43765 313 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 MTX2O75431 263 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 DCTN3O75935 186 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 PCDH8O95206 1070 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 ALOX15P16050 662 aaPredicted RBP11.09□□□□□ -0.63
CACNB3-224ENST00000552812 ITGB6P18564 788 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 TEAD1P28347 426 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 CCR7P32248 378 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 RPS21P63220 83 aaKnown RBP11.09□□□□□ -0.63
CACNB3-224ENST00000552812 SF3A3Q12874 501 aaKnown RBP eCLIP11.09□□□□□ -0.63
CACNB3-224ENST00000552812 TMEM115Q12893 351 aaPredicted RBP11.09□□□□□ -0.63
CACNB3-224ENST00000552812 PRKAA1Q13131 559 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 MLF2Q15773 248 aaPredicted RBP11.09□□□□□ -0.63
CACNB3-224ENST00000552812 KHDC1Q4VXA5 237 aaKnown RBP11.09□□□□□ -0.63
CACNB3-224ENST00000552812 ACSBG2Q5FVE4 666 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 ARL13AQ5H913 290 aaPredicted RBP11.09□□□□□ -0.63
CACNB3-224ENST00000552812 PLEKHS1Q5SXH7 462 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 NEK5Q6P3R8 708 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 TRPM8Q7Z2W7 1104 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 GPSM1Q86YR5 675 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 CCNYL1Q8N7R7 359 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 PHF21BQ96EK2 531 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 SIPA1Q96FS4 1042 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 THOC1Q96FV9 657 aaKnown RBP11.09□□□□□ -0.63
CACNB3-224ENST00000552812 ZNF514Q96K75 400 aaPredicted RBP11.09□□□□□ -0.63
CACNB3-224ENST00000552812 ASB2Q96Q27 587 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 KCNK13Q9HB14 408 aa11.09□□□□□ -0.63
CACNB3-224ENST00000552812 CYP4F12Q9HCS2 524 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms