RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 NFE2Q16621 373 aaPredicted RBP12.53□□□□□ -0.4
SMG8-202ENST00000543872 PKDCCQ504Y2 493 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 PARP16Q8N5Y8 322 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 TP53I13Q8NBR0 393 aaPredicted RBP12.53□□□□□ -0.4
SMG8-202ENST00000543872 UCKL1Q9NWZ5 548 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 C3orf18Q9UK00 162 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 NME7Q9Y5B8 376 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 CSADQ9Y600 493 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 MAU2Q9Y6X3 613 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 SNTNA6NMZ2 147 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 FAM20BO75063 409 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 SLC22A3O75751 556 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 CYP7B1O75881 506 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 RECQL5O94762 991 aaPredicted RBP12.53□□□□□ -0.4
SMG8-202ENST00000543872 PTTG1O95997 202 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 NPR1P16066 1061 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 NDUFV1P49821 464 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 ACOX1Q15067 660 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 SOWAHCQ53LP3 525 aaPredicted RBP12.53□□□□□ -0.4
SMG8-202ENST00000543872 ZNF544Q6NX49 715 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 TBL1YQ9BQ87 522 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 MUC13Q9H3R2 512 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 LEF1Q9UJU2 399 aaPredicted RBP12.53□□□□□ -0.4
SMG8-202ENST00000543872 TPRKBQ9Y3C4 175 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 PCP4L1A6NKN8 68 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 DFFAO00273 331 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 DCLK1O15075 740 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 ZNF37AP17032 561 aaPredicted RBP12.53□□□□□ -0.4
SMG8-202ENST00000543872 HTR1EP28566 365 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 CD6P30203 668 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 WEE1P30291 646 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 CXCR3P49682 368 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 POLR2JP52435 117 aaKnown RBP12.53□□□□□ -0.4
SMG8-202ENST00000543872 NKG7Q16617 165 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 SLC25A52Q3SY17 297 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.53□□□□□ -0.4
SMG8-202ENST00000543872 LINC00299Q6ZSB3 139 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 TMEM179BQ7Z7N9 219 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 GLRX5Q86SX6 157 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 TOR1AIP2Q8NFQ8 470 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 PEX13Q92968 403 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 NCLNQ969V3 563 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 C8orf48Q96LL4 319 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 TEKT5Q96M29 485 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 SNX18Q96RF0 628 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 ACOX2Q99424 681 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 RBM4BQ9BQ04 359 aaKnown RBP12.53□□□□□ -0.4
SMG8-202ENST00000543872 RBM4Q9BWF3 364 aaKnown RBP12.53□□□□□ -0.4
SMG8-202ENST00000543872 BBS2Q9BXC9 721 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 ZNF717Q9BY31 904 aaPredicted RBP12.53□□□□□ -0.4
SMG8-202ENST00000543872 PIGVQ9NUD9 493 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 EHD3Q9NZN3 535 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 ADGRE2Q9UHX3 823 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 FBXO10Q9UK96 956 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 PCDHB14Q9Y5E9 798 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 WDR81Q562E7 1941 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 FAM92AA1XBS5 289 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 EVPLLA8MZ36 301 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 HAT1O14929 419 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 MTSS1O43312 755 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 AIREO43918 545 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 CYBBP04839 570 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 CCDC159P0C7I6 412 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 CYP2C18P33260 490 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 DAB2P98082 770 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 TBRG1Q3YBR2 411 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 HECTD2Q5U5R9 776 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 CES5AQ6NT32 575 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 AHSA2Q719I0 299 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 UBE2FQ969M7 185 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 PYCR2Q96C36 320 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 HBEGFQ99075 208 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 TRMOQ9BU70 441 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 THUMPD3Q9BV44 507 aaKnown RBP12.52□□□□□ -0.4
SMG8-202ENST00000543872 LRRC3Q9BY71 257 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 MRPL9Q9BYD2 267 aaKnown RBP12.52□□□□□ -0.4
SMG8-202ENST00000543872 RNF167Q9H6Y7 350 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 DNAJB9Q9UBS3 223 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 KCNN3Q9UGI6 736 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 STAP1Q9ULZ2 295 aa12.52□□□□□ -0.4
SMG8-202ENST00000543872 DGKQP52824 942 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 FOXM1Q08050 763 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 STXBP2Q15833 593 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 BCL7AQ4VC05 210 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 CYP20A1Q6UW02 462 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 RAB44Q7Z6P3 723 aaPredicted RBP12.52□□□□□ -0.41
SMG8-202ENST00000543872 B3GNT8Q7Z7M8 397 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 SLC51BQ86UW2 128 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 ZDHHC17Q8IUH5 632 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 SLC2A14Q8TDB8 520 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 MYOCQ99972 504 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 CLPBQ9H078 707 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 CXCL16Q9H2A7 254 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 MMP27Q9H306 513 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 ACTR8Q9H981 624 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 AS3MTQ9HBK9 375 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 ERVK13-1Q9NX77 482 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 TOR4AQ9NXH8 423 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 RCOR3Q9P2K3 495 aaPredicted RBP12.52□□□□□ -0.41
SMG8-202ENST00000543872 MAGEL2Q9UJ55 1249 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms