RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 SNX12Q9UMY4 172 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 LOXL2Q9Y4K0 774 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 ADAMTS20P59510 1910 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 CCDC162PA2VCL2 907 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 CDRT15L2A8MXV6 281 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 KIF5CO60282 957 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 TNFSF15O95150 251 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 MSNP26038 577 aaKnown RBP14.78□□□□□ -0.04
UBE3B-212ENST00000540230 ITPKBP27987 946 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 FOXN2P32314 431 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 MAPK9P45984 424 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 LIMK2P53671 638 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 CRADDP78560 199 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 GPLD1P80108 840 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 SQSTM1Q13501 440 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 DBN1Q16643 649 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 CYP1B1Q16678 543 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 GPR33Q49SQ1 333 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 BCL7AQ4VC05 210 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 TSTD2Q5T7W7 516 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 AGAP9Q5VTM2 703 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 IGF2-ASQ6U949 168 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 WASH2PQ6VEQ5 465 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 FBXO39Q8N4B4 442 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 HNRNPLLQ8WVV9 542 aaKnown RBP14.78□□□□□ -0.04
UBE3B-212ENST00000540230 MAGOHBQ96A72 148 aaKnown RBP14.78□□□□□ -0.04
UBE3B-212ENST00000540230 CRELD1Q96HD1 420 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 NAF1Q96HR8 494 aaKnown RBP14.78□□□□□ -0.04
UBE3B-212ENST00000540230 ZNF578Q96N58 590 aaPredicted RBP14.78□□□□□ -0.04
UBE3B-212ENST00000540230 RANBP9Q96S59 729 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 STRADBQ9C0K7 418 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 STN1Q9H668 368 aaKnown RBP14.78□□□□□ -0.04
UBE3B-212ENST00000540230 WASH6PQ9NQA3 447 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 EIF2B3Q9NR50 452 aaKnown RBP14.78□□□□□ -0.04
UBE3B-212ENST00000540230 HOMER3Q9NSC5 361 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 ZDHHC3Q9NYG2 299 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 OGFRQ9NZT2 677 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 TCAF1Q9Y4C2 921 aa14.78□□□□□ -0.04
UBE3B-212ENST00000540230 DNMT3AQ9Y6K1 912 aaPredicted RBP14.78□□□□□ -0.04
UBE3B-212ENST00000540230 A0A087WV48 116 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 HEATR9A2RTY3 570 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 PGRMC1O00264 195 aaKnown RBP14.77□□□□□ -0.04
UBE3B-212ENST00000540230 VIPP01282 170 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 THRAP10827 490 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 ATP1B2P14415 290 aaPredicted RBP14.77□□□□□ -0.04
UBE3B-212ENST00000540230 VCLP18206 1134 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 ADRA1DP25100 572 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 PRLHRP49683 370 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 SESN2P58004 480 aaPredicted RBP14.77□□□□□ -0.04
UBE3B-212ENST00000540230 CACNG1Q06432 222 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 DUS1LQ6P1R4 473 aaKnown RBP14.77□□□□□ -0.04
UBE3B-212ENST00000540230 TMEM26Q6ZUK4 368 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 TAS2R42Q7RTR8 314 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 LSMEM2Q8N112 164 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 CLDN19Q8N6F1 224 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 SPDYE1Q8NFV5 336 aaPredicted RBP14.77□□□□□ -0.04
UBE3B-212ENST00000540230 OR4D9Q8NGE8 314 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 OR2L2Q8NH16 312 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 OR10G6Q8NH81 332 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 HDAC10Q969S8 669 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 DCUN1D1Q96GG9 259 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 AHCYL2Q96HN2 611 aaKnown RBP14.77□□□□□ -0.04
UBE3B-212ENST00000540230 ZNF514Q96K75 400 aaPredicted RBP14.77□□□□□ -0.04
UBE3B-212ENST00000540230 LINC00615Q96LM1 132 aaPredicted RBP14.77□□□□□ -0.04
UBE3B-212ENST00000540230 PISDQ9UG56 409 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 RALYQ9UKM9 306 aaKnown RBP14.77□□□□□ -0.04
UBE3B-212ENST00000540230 CFAP20Q9Y6A4 193 aaKnown RBP14.77□□□□□ -0.04
UBE3B-212ENST00000540230 PRSS21Q9Y6M0 314 aa14.77□□□□□ -0.04
UBE3B-212ENST00000540230 MGAT4DA6NG13 374 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 LILRA5A6NI73 299 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 TMX2-CTNND1H3BSU7 103 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 FANCGO15287 622 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 DUX1O43812 170 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 KCNJ13O60928 360 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 GOT2P00505 430 aaKnown RBP14.76□□□□□ -0.05
UBE3B-212ENST00000540230 KRT14P02533 472 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 CCL4P13236 92 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 RBMS1P29558 406 aaKnown RBP14.76□□□□□ -0.05
UBE3B-212ENST00000540230 COILP38432 576 aaPredicted RBP14.76□□□□□ -0.05
UBE3B-212ENST00000540230 PPM1FP49593 454 aaPredicted RBP14.76□□□□□ -0.05
UBE3B-212ENST00000540230 ERVPABLB-1P60509 514 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 ACVR1Q04771 509 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 CCDC173Q0VFZ6 552 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 EIF3IQ13347 325 aaKnown RBP14.76□□□□□ -0.05
UBE3B-212ENST00000540230 KCNJ11Q14654 390 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 RPE65Q16518 533 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 SKIDA1Q1XH10 827 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 COL28A1Q2UY09 1125 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 ANKRD22Q5VYY1 191 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 METRNLQ641Q3 311 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 TMEM71Q6P5X7 295 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 CCDC137Q6PK04 289 aaKnown RBP14.76□□□□□ -0.05
UBE3B-212ENST00000540230 TRIM48Q8IWZ4 208 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 ACTRT1Q8TDG2 376 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 JPH3Q8WXH2 748 aaPredicted RBP14.76□□□□□ -0.05
UBE3B-212ENST00000540230 NCSTNQ92542 709 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 SH3KBP1Q96B97 665 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 ZMYND15Q9H091 742 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 SLC40A1Q9NP59 571 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 CHRAC1Q9NRG0 131 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms