RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 DDHD1Q8NEL9 900 aa16.66■□□□□ 0.26
COPS3-212ENST00000539941 MIPOL1Q8TD10 442 aa16.66■□□□□ 0.26
COPS3-212ENST00000539941 EZH1Q92800 747 aaPredicted RBP16.66■□□□□ 0.26
COPS3-212ENST00000539941 SCAMP4Q969E2 229 aa16.66■□□□□ 0.26
COPS3-212ENST00000539941 L3HYPDHQ96EM0 354 aa16.66■□□□□ 0.26
COPS3-212ENST00000539941 CCDC97Q96F63 343 aaPredicted RBP16.66■□□□□ 0.26
COPS3-212ENST00000539941 LINGO1Q96FE5 620 aa16.66■□□□□ 0.26
COPS3-212ENST00000539941 DCUN1D1Q96GG9 259 aa16.66■□□□□ 0.26
COPS3-212ENST00000539941 TRMOQ9BU70 441 aa16.66■□□□□ 0.26
COPS3-212ENST00000539941 RIOK2Q9BVS4 552 aaKnown RBP16.66■□□□□ 0.26
COPS3-212ENST00000539941 ILKAPQ9H0C8 392 aaPredicted RBP16.66■□□□□ 0.26
COPS3-212ENST00000539941 WWP1Q9H0M0 922 aa16.66■□□□□ 0.26
COPS3-212ENST00000539941 ABCG8Q9H221 673 aa16.66■□□□□ 0.26
COPS3-212ENST00000539941 SARS2Q9NP81 518 aaKnown RBP16.66■□□□□ 0.26
COPS3-212ENST00000539941 ABCF3Q9NUQ8 709 aa16.66■□□□□ 0.26
COPS3-212ENST00000539941 TMPRSS11EQ9UL52 423 aa16.66■□□□□ 0.26
COPS3-212ENST00000539941 IQCF5A8MTL0 148 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 EIF3FO00303 357 aaPredicted RBP16.65■□□□□ 0.26
COPS3-212ENST00000539941 QSOX1O00391 747 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 SYNCRIPO60506 623 aaKnown RBP16.65■□□□□ 0.26
COPS3-212ENST00000539941 AP2A2O94973 939 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 SLC25A14O95258 325 aaPredicted RBP16.65■□□□□ 0.26
COPS3-212ENST00000539941 CBSLP0DN79 551 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 GM2AP17900 193 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 IMPDH1P20839 514 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 DGKAP23743 735 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 CBSP35520 551 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 KCNC1P48547 511 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 B4GALNT1Q00973 533 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 GALNT1Q10472 559 aaPredicted RBP16.65■□□□□ 0.26
COPS3-212ENST00000539941 TBC1D25Q3MII6 688 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 LDLRAP1Q5SW96 308 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 THEMIS2Q5TEJ8 643 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 RAB44Q7Z6P3 723 aaPredicted RBP16.65■□□□□ 0.26
COPS3-212ENST00000539941 NLRP8Q86W28 1048 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 CPNE9Q8IYJ1 553 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 ZBTB2Q8N680 514 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 FAM81AQ8TBF8 368 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 EEF1AKMT1Q8WVE0 214 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 AP2M1Q96CW1 435 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 LRRC37BQ96QE4 947 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 KCTD5Q9NXV2 234 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 RNF112Q9ULX5 631 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 ITM2BQ9Y287 266 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 NEMP2A6NFY4 417 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 AP1G1O43747 822 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 TRIM16O95361 564 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 DRD1P21728 446 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 C5AR1P21730 350 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 NTSR1P30989 418 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 P2RY2P41231 377 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 CST6Q15828 149 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 LRRC23Q53EV4 343 aaPredicted RBP16.65■□□□□ 0.26
COPS3-212ENST00000539941 TMEM196Q5HYL7 178 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 SPDYAQ5MJ70 313 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 SDE2Q6IQ49 451 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 TRMT11Q7Z4G4 463 aaKnown RBP16.65■□□□□ 0.26
COPS3-212ENST00000539941 ADAMTSL2Q86TH1 951 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 SPNS2Q8IVW8 549 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 BTN2A2Q8WVV5 523 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 TMEM237Q96Q45 408 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 GABRG3Q99928 467 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 WRAP53Q9BUR4 548 aaKnown RBP16.65■□□□□ 0.26
COPS3-212ENST00000539941 KCNK12Q9HB15 430 aa16.65■□□□□ 0.26
COPS3-212ENST00000539941 MARCOQ9UEW3 520 aaPredicted RBP16.65■□□□□ 0.26
COPS3-212ENST00000539941 PIKFYVEQ9Y2I7 2098 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 SLCO1B7G3V0H7 640 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 BTN3A1O00481 513 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 NEMP1O14524 444 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 ATP5HO75947 161 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 KITP10721 976 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 MTHFD2P13995 350 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 ATP1B2P14415 290 aaPredicted RBP16.64■□□□□ 0.25
COPS3-212ENST00000539941 GLULP15104 373 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 AKT1P31749 480 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 TIE1P35590 1138 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 AQP5P55064 265 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 NCALDP61601 193 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 HERVK_113P63132 956 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 DPTQ07507 201 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 CNTN1Q12860 1018 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 STARD3Q14849 445 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 TSNQ15631 228 aaKnown RBP16.64■□□□□ 0.25
COPS3-212ENST00000539941 GALNTL6Q49A17 601 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 ARL13AQ5H913 290 aaPredicted RBP16.64■□□□□ 0.25
COPS3-212ENST00000539941 PIP5KL1Q5T9C9 394 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 ZNF776Q68DI1 518 aaPredicted RBP16.64■□□□□ 0.25
COPS3-212ENST00000539941 TXNDC11Q6PKC3 985 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 ATG14Q6ZNE5 492 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 SLC44A3Q8N4M1 653 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 FITM2Q8N6M3 262 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 CCNYL1Q8N7R7 359 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 OR2T3Q8NH03 318 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 LKAAEAR1Q8TD35 194 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 STON2Q8WXE9 905 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 GLYATL1Q969I3 302 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 FUBP1Q96AE4 644 aaKnown RBP16.64■□□□□ 0.25
COPS3-212ENST00000539941 MSANTD3Q96H12 275 aa16.64■□□□□ 0.25
COPS3-212ENST00000539941 PHF7Q9BWX1 381 aaPredicted RBP16.64■□□□□ 0.25
COPS3-212ENST00000539941 ERVK-6Q9BXR3 956 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms