RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 MARVELD2Q8N4S9 558 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 CHFRQ96EP1 664 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 APPL1Q9UKG1 709 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 PACSIN3Q9UKS6 424 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 IQCF5A8MTL0 148 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 TMEM114B3SHH9 223 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 PFDN6O15212 129 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 DENRO43583 198 aaKnown RBP16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 PGM3O95394 542 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 PTGER3P43115 390 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 ACAP2Q15057 778 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 FNDC3BQ53EP0 1204 aaKnown RBP16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 LIPMQ5VYY2 423 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 SNX20Q7Z614 316 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 ISCA2Q86U28 154 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 GPR21Q99679 349 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 SLC30A3Q99726 388 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 BOCQ9BWV1 1114 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 POMKQ9H5K3 350 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 ALG9Q9H6U8 611 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 TCF7L2Q9NQB0 619 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 TAS2R13Q9NYV9 303 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 PRPF19Q9UMS4 504 aaKnown RBP16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 KIF26AQ9ULI4 1882 aaPredicted RBP16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 hCG_2014768A0A024R1R8 64 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 AIM2O14862 343 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 CD1EP15812 388 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 TIMP2P16035 220 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 TFEBP19484 476 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 KCNA5P22460 613 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 GDI1P31150 447 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 LTBRP36941 435 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 SERPINB5P36952 375 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 SPAM1P38567 509 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 CCR10P46092 362 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 NUDT2P50583 147 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 NAGLUP54802 743 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 KLC3Q6P597 504 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 CBARPQ8N350 705 aaPredicted RBP16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 CPA6Q8N4T0 437 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 TERB1Q8NA31 727 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 AGR3Q8TD06 166 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 PBXIP1Q96AQ6 731 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 PTERQ96BW5 349 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 POPDC3Q9HBV1 291 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 SARDHQ9UL12 918 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 COL4A3Q01955 1670 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 A0A1W2PQ67 120 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 TBC1D3BA6NDS4 549 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 H3BMM5 538 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 C1SP09871 688 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 THRAP10827 490 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 CD1DP15813 335 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 ITGALP20701 1170 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 PIK3R1P27986 724 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 SLC26A3P40879 764 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 KPNA2P52292 529 aaKnown RBP16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 TXNDC5Q8NBS9 432 aaKnown RBP16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 ERLEC1Q96DZ1 483 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 SERPINI1Q99574 410 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 C19orf43Q9BQ61 176 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 P2RY12Q9H244 342 aa16.87■□□□□ 0.29
PCDHB17P-201ENST00000539533 DNAJA2O60884 412 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 CHRM3P20309 590 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 METAP1P53582 386 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 ZNF234Q14588 700 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 ZNF805Q5CZA5 627 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 C16orf89Q6UX73 402 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 CERS6Q6ZMG9 384 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 SNX32Q86XE0 403 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 STK40Q8N2I9 435 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 SIDT2Q8NBJ9 832 aaKnown RBP16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 SREK1Q8WXA9 508 aaKnown RBP16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 ELSPBP1Q96BH3 223 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 DGCR14Q96DF8 476 aaKnown RBP16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 PLEKHG4BQ96PX9 1271 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 Q9H521 79 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 PCDH12Q9NPG4 1184 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 RHBDL2Q9NX52 303 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 CD84Q9UIB8 345 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 GOLGA8QA0A0J9YX86 632 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 GOLGA8OA6NCC3 632 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 C16orf96A6NNT2 1141 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 GOLGA8NF8WBI6 632 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 PFDN1O60925 122 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 RBP1P09455 135 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 ADARP55265 1226 aaKnown RBP16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 PFKPQ01813 784 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 EIF4HQ15056 248 aaKnown RBP16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 C9orf64Q5T6V5 341 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 CHRDL2Q6WN34 429 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 CLDN19Q8N6F1 224 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 CNDP1Q96KN2 507 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 ABCG8Q9H221 673 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 CYP4F12Q9HCS2 524 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 UBAP1Q9NZ09 502 aa16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 OAS3Q9Y6K5 1087 aaKnown RBP16.86■□□□□ 0.29
PCDHB17P-201ENST00000539533 ZNF106Q9H2Y7 1883 aaKnown RBP16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 TRBV5-4A0A0C4DH59 114 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms