RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 TSPAN33Q86UF1 283 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 MYLK4Q86YV6 388 aaPredicted RBP8.75□□□□□ -1.01
DDB1-213ENST00000539332 PAF1Q8N7H5 531 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 DTX3LQ8TDB6 740 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 HEXDCQ8WVB3 486 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 JADE3Q92613 823 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 HIC2Q96JB3 615 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 TSNARE1Q96NA8 513 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 SORT1Q99523 831 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 TMEM120AQ9BXJ8 343 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 C1orf21Q9H246 121 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 KCNK13Q9HB14 408 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 BPIFA1Q9NP55 256 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 TAS2R1Q9NYW7 299 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 XPR1Q9UBH6 696 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 IL36AQ9UHA7 158 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 RUVBL2Q9Y230 463 aaKnown RBP8.75□□□□□ -1.01
DDB1-213ENST00000539332 CRYL1Q9Y2S2 319 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 A0A0G2JND7 137 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 UPK3BL1B0FP48 263 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 TMEM114B3SHH9 223 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 UPK3BL2E5RIL1 263 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 PFDN6O15212 129 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 TRIM13O60858 407 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 NDUFS3O75489 264 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 SRP72O76094 671 aaKnown RBP8.74□□□□□ -1.01
DDB1-213ENST00000539332 SLC4A1P02730 911 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 ESR1P03372 595 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 MYL2P10916 166 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 RALBP11234 206 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 PKMP14618 531 aaKnown RBP8.74□□□□□ -1.01
DDB1-213ENST00000539332 SAT1P21673 171 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 CD72P21854 359 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 ARRB2P32121 409 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 SPAM1P38567 509 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 WASP42768 502 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 DCDC1P59894 354 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 DNAJB13P59910 316 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 POLR2LP62875 67 aaKnown RBP8.74□□□□□ -1.01
DDB1-213ENST00000539332 CCINQ13939 588 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 ACAP2Q15057 778 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 MLF2Q15773 248 aaPredicted RBP8.74□□□□□ -1.01
DDB1-213ENST00000539332 GPR33Q49SQ1 333 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 CTSL3PQ5NE16 218 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 LYPLAL1Q5VWZ2 237 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 LIPMQ5VYY2 423 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 ZDHHC20Q5W0Z9 365 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 LRRC66Q68CR7 880 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 IZUMO2Q6UXV1 221 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 ATG14Q6ZNE5 492 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 ZCCHC23Q6ZST2 131 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 SNX20Q7Z614 316 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 PIM3Q86V86 326 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 SCUBE1Q8IWY4 988 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 IL17RCQ8NAC3 791 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 ANKRD49Q8WVL7 239 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 OR8D1Q8WZ84 308 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 FAM3CQ92520 227 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 KCNJ9Q92806 393 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.74□□□□□ -1.01
DDB1-213ENST00000539332 KLHL32Q96NJ5 620 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 PLEKHG4BQ96PX9 1271 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 WWP1Q9H0M0 922 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 IL26Q9NPH9 171 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 PRSS16Q9NQE7 514 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 PTTG2Q9NZH5 202 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 B4GALT6Q9UBX8 382 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 SUN2Q9UH99 717 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 TAGLN3Q9UI15 199 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 PPM1HQ9ULR3 514 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 MTF2Q9Y483 593 aaPredicted RBP8.74□□□□□ -1.01
DDB1-213ENST00000539332 PCDHB1Q9Y5F3 818 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 SLC30A1Q9Y6M5 507 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 DOCK9Q9BZ29 2069 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 TRPM6Q9BX84 2022 aa8.74□□□□□ -1.01
DDB1-213ENST00000539332 IGLV3-16A0A075B6K0 115 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 FCHO1O14526 889 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 AP1G1O43747 822 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 DLX3O60479 287 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 PRAMEF1O95521 474 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 PRNPP04156 253 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 PYGLP06737 847 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 RBP1P09455 135 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 C1SP09871 688 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 TIMP2P16035 220 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 ALOX15P16050 662 aaPredicted RBP8.73□□□□□ -1.01
DDB1-213ENST00000539332 ITGALP20701 1170 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 NTSR1P30989 418 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 VIPR1P32241 457 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 CA5AP35218 305 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 SLC1A6P48664 564 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 SPINT3P49223 89 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 ABCE1P61221 599 aaKnown RBP8.73□□□□□ -1.01
DDB1-213ENST00000539332 NFKB2Q00653 900 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 PTSQ03393 145 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 OVGP1Q12889 678 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 MED21Q13503 144 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 CAMK2GQ13555 558 aaPredicted RBP8.73□□□□□ -1.01
DDB1-213ENST00000539332 CSHL1Q14406 222 aa8.73□□□□□ -1.01
DDB1-213ENST00000539332 ZNF805Q5CZA5 627 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms