RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 C9orf172C9J069 976 aa29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 CCL22O00626 93 aa29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 FGF3P11487 239 aaPredicted RBP29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 ITGALP20701 1170 aa29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 HALP42357 657 aa29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 POU6F1Q14863 301 aa29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 CLCA4Q14CN2 919 aa29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 SNAP47Q5SQN1 464 aa29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 TMEM164Q5U3C3 297 aa29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 FAM83HQ6ZRV2 1179 aaPredicted RBP29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 BEND7Q8N7W2 519 aaPredicted RBP29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 CXorf40BQ96DE9 158 aa29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 FAM96AQ9H5X1 160 aa29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 ETNK1Q9HBU6 452 aa29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 CPNE5Q9HCH3 593 aa29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 PIH1D1Q9NWS0 290 aaKnown RBP29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 FOXJ2Q9P0K8 574 aa29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 PPP2R2CQ9Y2T4 447 aa29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 SLC30A1Q9Y6M5 507 aa29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 LOC400499M0QZD8 3231 aa29.72■■■□□ 2.35
SSSCA1-207ENST00000533115 MC4RP32245 332 aa29.72■■■□□ 2.35
SSSCA1-207ENST00000533115 FDFT1P37268 417 aa29.72■■■□□ 2.35
SSSCA1-207ENST00000533115 SEPT6Q14141 434 aa29.72■■■□□ 2.35
SSSCA1-207ENST00000533115 NFE2L1Q14494 772 aa29.72■■■□□ 2.35
SSSCA1-207ENST00000533115 SIX1Q15475 284 aaPredicted RBP29.72■■■□□ 2.35
SSSCA1-207ENST00000533115 GPR155Q7Z3F1 870 aa29.72■■■□□ 2.35
SSSCA1-207ENST00000533115 ARHGAP22Q7Z5H3 698 aa29.72■■■□□ 2.35
SSSCA1-207ENST00000533115 RBM12BQ8IXT5 1001 aaKnown RBP29.72■■■□□ 2.35
SSSCA1-207ENST00000533115 NXPE1Q8N323 547 aa29.72■■■□□ 2.35
SSSCA1-207ENST00000533115 DCUN1D1Q96GG9 259 aa29.72■■■□□ 2.35
SSSCA1-207ENST00000533115 TAAR9Q96RI9 348 aa29.72■■■□□ 2.35
SSSCA1-207ENST00000533115 SLC40A1Q9NP59 571 aa29.72■■■□□ 2.35
SSSCA1-207ENST00000533115 NLE1Q9NVX2 485 aaPredicted RBP29.72■■■□□ 2.35
SSSCA1-207ENST00000533115 A8MU76 341 aa29.71■■■□□ 2.35
SSSCA1-207ENST00000533115 H7C0S8 307 aa29.71■■■□□ 2.35
SSSCA1-207ENST00000533115 RALBP11234 206 aa29.71■■■□□ 2.35
SSSCA1-207ENST00000533115 PBLDP30039 288 aaPredicted RBP29.71■■■□□ 2.35
SSSCA1-207ENST00000533115 GPR33Q49SQ1 333 aa29.71■■■□□ 2.35
SSSCA1-207ENST00000533115 BCL7AQ4VC05 210 aa29.71■■■□□ 2.35
SSSCA1-207ENST00000533115 NAT14Q8WUY8 206 aa29.71■■■□□ 2.35
SSSCA1-207ENST00000533115 TLR10Q9BXR5 811 aa29.71■■■□□ 2.35
SSSCA1-207ENST00000533115 OGFRQ9NZT2 677 aa29.71■■■□□ 2.35
SSSCA1-207ENST00000533115 AHCTF1Q8WYP5 2266 aa29.71■■■□□ 2.35
SSSCA1-207ENST00000533115 MGAT4DA6NG13 374 aa29.7■■■□□ 2.35
SSSCA1-207ENST00000533115 UBXN7O94888 489 aa29.7■■■□□ 2.35
SSSCA1-207ENST00000533115 LIPCP11150 499 aa29.7■■■□□ 2.35
SSSCA1-207ENST00000533115 CCNG2Q16589 344 aa29.7■■■□□ 2.35
SSSCA1-207ENST00000533115 METRNLQ641Q3 311 aa29.7■■■□□ 2.35
SSSCA1-207ENST00000533115 PLXDC1Q8IUK5 500 aa29.7■■■□□ 2.35
SSSCA1-207ENST00000533115 OR52K1Q8NGK4 314 aa29.7■■■□□ 2.35
SSSCA1-207ENST00000533115 STYXQ8WUJ0 223 aa29.7■■■□□ 2.35
SSSCA1-207ENST00000533115 HEXDCQ8WVB3 486 aa29.7■■■□□ 2.35
SSSCA1-207ENST00000533115 COPS8Q99627 209 aa29.7■■■□□ 2.35
SSSCA1-207ENST00000533115 OCIAD1Q9NX40 245 aa29.7■■■□□ 2.35
SSSCA1-207ENST00000533115 PSMD13Q9UNM6 376 aa29.7■■■□□ 2.35
SSSCA1-207ENST00000533115 KLHL33A6NCF5 533 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 SGTAO43765 313 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 SUN1O94901 812 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 ETS1P14921 441 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 CD82P27701 267 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 LMAN1P49257 510 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 CDH17Q12864 832 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 GPR18Q14330 331 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 RPE65Q16518 533 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 ZRANB3Q5FWF4 1079 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 PRUNE1Q86TP1 453 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 ZFAND4Q86XD8 727 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 CCDC89Q8N998 374 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 DNAAF3Q8N9W5 541 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 OR2L2Q8NH16 312 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 CDKN2AIPNLQ96HQ2 116 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 LINC00615Q96LM1 132 aaPredicted RBP29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 KLHL3Q9UH77 587 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 PCDHGA3Q9Y5H0 932 aa29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 MN1Q10571 1320 aaPredicted RBP29.69■■■□□ 2.34
SSSCA1-207ENST00000533115 TRBV5-4A0A0C4DH59 114 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 EFCAB7A8K855 629 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 B4E171 279 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 CFAP99D6REC4 459 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 E7EVH7 732 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 TYRP1P17643 537 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 AMD1P17707 334 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 TSPAN7P41732 249 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 CDKN1CP49918 316 aaPredicted RBP29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 TGIF1Q15583 401 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 SOWAHCQ53LP3 525 aaPredicted RBP29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 ARHGAP40Q5TG30 622 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 DRICH1Q6PGQ1 229 aaPredicted RBP29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 FAM129CQ86XR2 697 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 MAIP1Q8WWC4 291 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 ART4Q93070 314 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 UBL7Q96S82 380 aaPredicted RBP29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 GRPEL1Q9HAV7 217 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 RAB6BQ9NRW1 208 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 WDR70Q9NW82 654 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 ZDHHC3Q9NYG2 299 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 PAK5Q9P286 719 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 ZKSCAN5Q9Y2L8 839 aa29.68■■■□□ 2.34
SSSCA1-207ENST00000533115 TEX51A0A1B0GUA7 166 aa29.67■■■□□ 2.34
SSSCA1-207ENST00000533115 MROH6A6NGR9 719 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms