RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 SMOXQ9NWM0 555 aa17.48■□□□□ 0.39
SMG1-203ENST00000532700 SIDT1Q9NXL6 827 aaKnown RBP17.48■□□□□ 0.39
SMG1-203ENST00000532700 FAM8A1Q9UBU6 413 aa17.48■□□□□ 0.39
SMG1-203ENST00000532700 PCDHGA3Q9Y5H0 932 aa17.48■□□□□ 0.39
SMG1-203ENST00000532700 CFAP20Q9Y6A4 193 aaKnown RBP17.48■□□□□ 0.39
SMG1-203ENST00000532700 FASNP49327 2511 aaKnown RBP17.47■□□□□ 0.39
SMG1-203ENST00000532700 LDB2O43679 373 aa17.47■□□□□ 0.39
SMG1-203ENST00000532700 KRT86O43790 486 aa17.47■□□□□ 0.39
SMG1-203ENST00000532700 C9P02748 559 aa17.47■□□□□ 0.39
SMG1-203ENST00000532700 CCDC175P0C221 793 aa17.47■□□□□ 0.39
SMG1-203ENST00000532700 LPOP22079 712 aaPredicted RBP17.47■□□□□ 0.39
SMG1-203ENST00000532700 RHDQ02161 417 aa17.47■□□□□ 0.39
SMG1-203ENST00000532700 GSE1Q14687 1217 aa17.47■□□□□ 0.39
SMG1-203ENST00000532700 TAF1BQ53T94 588 aaPredicted RBP17.47■□□□□ 0.39
SMG1-203ENST00000532700 FNBP1LQ5T0N5 605 aa17.47■□□□□ 0.39
SMG1-203ENST00000532700 AGAP9Q5VTM2 703 aa17.47■□□□□ 0.39
SMG1-203ENST00000532700 TIPARPQ7Z3E1 657 aaKnown RBP17.47■□□□□ 0.39
SMG1-203ENST00000532700 EXD3Q8N9H8 876 aa17.47■□□□□ 0.39
SMG1-203ENST00000532700 SPDYE1Q8NFV5 336 aaPredicted RBP17.47■□□□□ 0.39
SMG1-203ENST00000532700 ZNF398Q8TD17 642 aa17.47■□□□□ 0.39
SMG1-203ENST00000532700 RTP4Q96DX8 246 aa17.47■□□□□ 0.39
SMG1-203ENST00000532700 TBL1YQ9BQ87 522 aa17.47■□□□□ 0.39
SMG1-203ENST00000532700 TMEM121Q9BTD3 319 aa17.47■□□□□ 0.39
SMG1-203ENST00000532700 PKP3Q9Y446 797 aa17.47■□□□□ 0.39
SMG1-203ENST00000532700 C5orf60A6NFR6 353 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 OR5K4A6NMS3 321 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 B4E171 279 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 TK2O00142 265 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 SRP72O76094 671 aaKnown RBP17.46■□□□□ 0.39
SMG1-203ENST00000532700 UBXN7O94888 489 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 TJP3O95049 919 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 VIPP01282 170 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 SLC2A4P14672 509 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 TPH1P17752 444 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 TSPAN7P41732 249 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 SH3BP2P78314 561 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 CCZ1BP86790 482 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 CCZ1P86791 482 aaPredicted RBP17.46■□□□□ 0.39
SMG1-203ENST00000532700 MC2RQ01718 297 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 DMPKQ09013 629 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 LDLRAP1Q5SW96 308 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 WASH2PQ6VEQ5 465 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 EXTL1Q92935 676 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 SH3KBP1Q96B97 665 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 DNAJC1Q96KC8 554 aaKnown RBP17.46■□□□□ 0.39
SMG1-203ENST00000532700 TGM7Q96PF1 710 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 DPYSL5Q9BPU6 564 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 DDA1Q9BW61 102 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 UCK1Q9HA47 277 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 WASH6PQ9NQA3 447 aa17.46■□□□□ 0.39
SMG1-203ENST00000532700 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.46■□□□□ 0.39
SMG1-203ENST00000532700 GCN1Q92616 2671 aaKnown RBP17.46■□□□□ 0.39
SMG1-203ENST00000532700 CCDC78A2IDD5 438 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 AGAP14A8MT82 685 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 ZW10O43264 779 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 PTMAP06454 111 aaKnown RBP17.45■□□□□ 0.38
SMG1-203ENST00000532700 LIFP15018 202 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 ZNF28P17035 718 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 IDSP22304 550 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 SEPHS1P49903 392 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 GTF2H3Q13889 308 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 RPE65Q16518 533 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 MANEAQ5SRI9 462 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 CERS6Q6ZMG9 384 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 AMZ2Q86W34 360 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 TRIM48Q8IWZ4 208 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 UBE2Q2Q8WVN8 375 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 C9orf72Q96LT7 481 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.45■□□□□ 0.38
SMG1-203ENST00000532700 B3GNT4Q9C0J1 378 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 STN1Q9H668 368 aaKnown RBP17.45■□□□□ 0.38
SMG1-203ENST00000532700 ASB8Q9H765 288 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 ARNT2Q9HBZ2 717 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 AKAP7Q9P0M2 348 aaPredicted RBP17.45■□□□□ 0.38
SMG1-203ENST00000532700 PILRAQ9UKJ1 303 aa17.45■□□□□ 0.38
SMG1-203ENST00000532700 EIF4E1BA6NMX2 242 aaKnown RBP17.44■□□□□ 0.38
SMG1-203ENST00000532700 STMND1H3BQB6 276 aa17.44■□□□□ 0.38
SMG1-203ENST00000532700 CAPN5O15484 640 aaPredicted RBP17.44■□□□□ 0.38
SMG1-203ENST00000532700 AKT1P31749 480 aa17.44■□□□□ 0.38
SMG1-203ENST00000532700 TNNT3P45378 269 aaPredicted RBP17.44■□□□□ 0.38
SMG1-203ENST00000532700 CAPZBP47756 277 aa17.44■□□□□ 0.38
SMG1-203ENST00000532700 ITGA9Q13797 1035 aa17.44■□□□□ 0.38
SMG1-203ENST00000532700 ZDHHC20Q5W0Z9 365 aa17.44■□□□□ 0.38
SMG1-203ENST00000532700 ZNF662Q6ZS27 426 aa17.44■□□□□ 0.38
SMG1-203ENST00000532700 FAM92BQ6ZTR7 304 aa17.44■□□□□ 0.38
SMG1-203ENST00000532700 UNC5BQ8IZJ1 945 aa17.44■□□□□ 0.38
SMG1-203ENST00000532700 GLIS1Q8NBF1 620 aa17.44■□□□□ 0.38
SMG1-203ENST00000532700 LSM14AQ8ND56 463 aaKnown RBP17.44■□□□□ 0.38
SMG1-203ENST00000532700 BRSK1Q8TDC3 778 aa17.44■□□□□ 0.38
SMG1-203ENST00000532700 RMDN2Q96LZ7 410 aa17.44■□□□□ 0.38
SMG1-203ENST00000532700 TTC25Q96NG3 672 aa17.44■□□□□ 0.38
SMG1-203ENST00000532700 INSM2Q96T92 566 aaPredicted RBP17.44■□□□□ 0.38
SMG1-203ENST00000532700 WWP1Q9H0M0 922 aa17.44■□□□□ 0.38
SMG1-203ENST00000532700 POT1Q9NUX5 634 aa17.44■□□□□ 0.38
SMG1-203ENST00000532700 GUCA1BQ9UMX6 200 aa17.44■□□□□ 0.38
SMG1-203ENST00000532700 AAR2Q9Y312 384 aaKnown RBP17.44■□□□□ 0.38
SMG1-203ENST00000532700 C2orf81A6NN90 581 aa17.43■□□□□ 0.38
SMG1-203ENST00000532700 MIF4GDA9UHW6 222 aaKnown RBP17.43■□□□□ 0.38
SMG1-203ENST00000532700 RAD1O60671 282 aa17.43■□□□□ 0.38
SMG1-203ENST00000532700 ANKRD34CP0C6C1 535 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms