RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 BRAFP15056 766 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 LPOP22079 712 aaPredicted RBP13.94□□□□□ -0.18
CAPN1-212ENST00000527887 CTNNA2P26232 953 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 CHRNA4P43681 627 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 MARCKSL1P49006 195 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 NAP1L1P55209 391 aaKnown RBP13.94□□□□□ -0.18
CAPN1-212ENST00000527887 ABHD18Q0P651 414 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 IL11RAQ14626 422 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 TAF1AQ15573 450 aaPredicted RBP13.94□□□□□ -0.18
CAPN1-212ENST00000527887 CHRNA6Q15825 494 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 TBR1Q16650 682 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 KHDC1Q4VXA5 237 aaKnown RBP13.94□□□□□ -0.18
CAPN1-212ENST00000527887 KLHL35Q6PF15 583 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 EXD3Q8N9H8 876 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 ACTL9Q8TC94 416 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 ZNF398Q8TD17 642 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 ZFPM2Q8WW38 1151 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 EXTL1Q92935 676 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 PMEPA1Q969W9 287 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 SLC45A3Q96JT2 553 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 SLC12A9Q9BXP2 914 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 ADNPQ9H2P0 1102 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 PPP2R2CQ9Y2T4 447 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 ZNF891A8MT65 544 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-212ENST00000527887 PJA2O43164 708 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 UGT1A9O60656 530 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 RBP3P10745 1247 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 TYRP1P17643 537 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 UGT1A6P19224 532 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 UGT1A1P22309 533 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 UGT1A4P22310 534 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 RPL10P27635 214 aaKnown RBP13.93□□□□□ -0.18
CAPN1-212ENST00000527887 CAPZBP47756 277 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 MC1RQ01726 317 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 OTUD4Q01804 1114 aaKnown RBP13.93□□□□□ -0.18
CAPN1-212ENST00000527887 SEPT7Q16181 437 aaKnown RBP13.93□□□□□ -0.18
CAPN1-212ENST00000527887 PLA2G4EQ3MJ16 856 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 CRTC2Q53ET0 693 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-212ENST00000527887 ANKRD20A2Q5SQ80 823 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 GPRC6AQ5T6X5 926 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 ANKRD20A1Q5TYW2 823 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 ANKRD20A3Q5VUR7 823 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 FAM151BQ6UXP7 276 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 PRSS42Q7Z5A4 293 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 RASGEF1AQ8N9B8 481 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 TTC13Q8NBP0 860 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 HEXDCQ8WVB3 486 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 JPH3Q8WXH2 748 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-212ENST00000527887 ZNF768Q9H5H4 540 aaKnown RBP13.93□□□□□ -0.18
CAPN1-212ENST00000527887 UGT1A7Q9HAW7 530 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 UGT1A10Q9HAW8 530 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 UGT1A8Q9HAW9 530 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 SIDT1Q9NXL6 827 aaKnown RBP13.93□□□□□ -0.18
CAPN1-212ENST00000527887 OGFRQ9NZT2 677 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 KLHL3Q9UH77 587 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 ACSL5Q9ULC5 683 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 SLC30A1Q9Y6M5 507 aa13.93□□□□□ -0.18
CAPN1-212ENST00000527887 BOD1L1Q8NFC6 3051 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 OR52A4PA6NMU1 304 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 STK17BO94768 372 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 CRTAMO95727 393 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 AGTP01019 485 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 LIFP15018 202 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 WT1P19544 449 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-212ENST00000527887 MSH3P20585 1137 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 ADRA1AP35348 466 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 HADHAP40939 763 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 EIF3EP60228 445 aaKnown RBP13.92□□□□□ -0.18
CAPN1-212ENST00000527887 GPR18Q14330 331 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 CLCA4Q14CN2 919 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 METRNLQ641Q3 311 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 BORAQ6PGQ7 559 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 DARS2Q6PI48 645 aaKnown RBP13.92□□□□□ -0.18
CAPN1-212ENST00000527887 TMEM220Q6QAJ8 160 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 REXO1L1PQ8IX06 675 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 ESX1Q8N693 406 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 UBE2Q2Q8WVN8 375 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 KLHL6Q8WZ60 621 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 SPATA13Q96N96 652 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 TGM7Q96PF1 710 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 ARNT2Q9HBZ2 717 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 STARD5Q9NSY2 213 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 GEMIN8Q9NWZ8 242 aaKnown RBP13.92□□□□□ -0.18
CAPN1-212ENST00000527887 SEMA5BQ9P283 1151 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 TUBD1Q9UJT1 453 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 TFR2Q9UP52 801 aa13.92□□□□□ -0.18
CAPN1-212ENST00000527887 RCCD1A6NED2 376 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 MGAT4DA6NG13 374 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 AGAP14A8MT82 685 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 MIF4GDA9UHW6 222 aaKnown RBP13.91□□□□□ -0.18
CAPN1-212ENST00000527887 GAPDHSO14556 408 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-212ENST00000527887 KCNN4O15554 427 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 SRP72O76094 671 aaKnown RBP13.91□□□□□ -0.18
CAPN1-212ENST00000527887 PRAMEF1O95521 474 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 DLGAP3O95886 979 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 RALBP11234 206 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 VAV2P52735 878 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 DRG2P55039 364 aaKnown RBP13.91□□□□□ -0.18
CAPN1-212ENST00000527887 GFERP55789 205 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 BPHLQ86WA6 291 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms