RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 UGT1A9O60656 530 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 CDK14O94921 469 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 RECKO95980 971 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 GYPCP04921 128 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 UGT1A6P19224 532 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 UGT1A1P22309 533 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 UGT1A4P22310 534 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 SSR1P43307 286 aaKnown RBP13.97□□□□□ -0.17
CPSF1-201ENST00000526271 CHRNA4P43681 627 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 CDK18Q07002 472 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 TMEM115Q12893 351 aaPredicted RBP13.97□□□□□ -0.17
CPSF1-201ENST00000526271 PTPRCAPQ14761 206 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 UGT8Q16880 541 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 PAPD7Q5XG87 772 aaKnown RBP13.97□□□□□ -0.17
CPSF1-201ENST00000526271 PDPK2PQ6A1A2 396 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 KDELC1Q6UW63 502 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 PPP1R3BQ86XI6 285 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 TMEM151BQ8IW70 566 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 CCNYQ8ND76 341 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 SYN2Q92777 582 aaPredicted RBP13.97□□□□□ -0.17
CPSF1-201ENST00000526271 AGAP3Q96P47 875 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 VPS35Q96QK1 796 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 XPO4Q9C0E2 1151 aaKnown RBP13.97□□□□□ -0.17
CPSF1-201ENST00000526271 UGT1A7Q9HAW7 530 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 UGT1A10Q9HAW8 530 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 UGT1A8Q9HAW9 530 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 IL26Q9NPH9 171 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 PCDHB3Q9Y5E6 796 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 POLEQ07864 2286 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 CBFA2T2O43439 604 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 SGTAO43765 313 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 VEGFDO43915 354 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 CEACAM4O75871 244 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 MTA2O94776 668 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 SERPING1P05155 500 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 MX2P20592 715 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 CA4P22748 312 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 FECHP22830 423 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 PTGIRP43119 386 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 ADCY2Q08462 1091 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 DMPKQ09013 629 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 TUBB3Q13509 450 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 NFE2L1Q14494 772 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 GPR19Q15760 415 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 CHRNA6Q15825 494 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 HADHQ16836 314 aaKnown RBP13.96□□□□□ -0.17
CPSF1-201ENST00000526271 ASTE1Q2TB18 679 aaPredicted RBP13.96□□□□□ -0.17
CPSF1-201ENST00000526271 ZNF789Q5FWF6 425 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 NT5DC3Q86UY8 548 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 TRIM48Q8IWZ4 208 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 LILRA3Q8N6C8 439 aaPredicted RBP13.96□□□□□ -0.17
CPSF1-201ENST00000526271 BEND7Q8N7W2 519 aaPredicted RBP13.96□□□□□ -0.17
CPSF1-201ENST00000526271 AVL9Q8NBF6 648 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 GALNT11Q8NCW6 608 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
CPSF1-201ENST00000526271 CPT1CQ8TCG5 803 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 CPLX3Q8WVH0 158 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 ZNF501Q96CX3 271 aaPredicted RBP13.96□□□□□ -0.17
CPSF1-201ENST00000526271 INSM2Q96T92 566 aaPredicted RBP13.96□□□□□ -0.17
CPSF1-201ENST00000526271 ADGRE3Q9BY15 652 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 SLC25A51Q9H1U9 297 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 UBP1Q9NZI7 540 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 LUZP4Q9P127 313 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 KCND3Q9UK17 655 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 PSMD13Q9UNM6 376 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 HEY1Q9Y5J3 304 aa13.96□□□□□ -0.17
CPSF1-201ENST00000526271 CFAP20Q9Y6A4 193 aaKnown RBP13.96□□□□□ -0.17
CPSF1-201ENST00000526271 LOC285095A0A1B0GVY8 99 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 ARGFXA6NJG6 315 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 C21orf140B9A014 251 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 LCA5LO95447 670 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 NDST3O95803 873 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 IDSP22304 550 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 PTPN3P26045 913 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 COL8A1P27658 744 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 PTPN4P29074 926 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 WASHC5Q12768 1159 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 ABRQ12979 859 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 MRPL49Q13405 166 aaKnown RBP13.95□□□□□ -0.18
CPSF1-201ENST00000526271 RHOT1Q8IXI2 618 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 D2HGDHQ8N465 521 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 ZNF514Q96K75 400 aaPredicted RBP13.95□□□□□ -0.18
CPSF1-201ENST00000526271 GORASP1Q9BQQ3 440 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 GPR63Q9BZJ6 419 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 GLOD4Q9HC38 313 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 LRRC4CQ9HCJ2 640 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 FGF21Q9NSA1 209 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 IL17CQ9P0M4 197 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 SAE1Q9UBE0 346 aaPredicted RBP13.95□□□□□ -0.18
CPSF1-201ENST00000526271 RARRES3Q9UL19 164 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 CAPN11Q9UMQ6 739 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 ANKRD12Q6UB98 2062 aa13.95□□□□□ -0.18
CPSF1-201ENST00000526271 OR5K3A6NET4 321 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 TTLL8A6PVC2 850 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 TCP11X1B4DZS4 312 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 BUD23O43709 281 aaKnown RBP13.94□□□□□ -0.18
CPSF1-201ENST00000526271 PMPCBO75439 489 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 POP7O75817 140 aaKnown RBP13.94□□□□□ -0.18
CPSF1-201ENST00000526271 CASP14P31944 242 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 ARCN1P48444 511 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms