RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 SCG3Q8WXD2 468 aaKnown RBP17.06■□□□□ 0.32
CCS-204ENST00000526066 CERS2Q96G23 380 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 FUT8Q9BYC5 575 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 CLMPQ9H6B4 373 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 SUDS3Q9H7L9 328 aaPredicted RBP17.06■□□□□ 0.32
CCS-204ENST00000526066 ASCL3Q9NQ33 180 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 SMOXQ9NWM0 555 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 MOCS1Q9NZB8 636 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 CSNK1G3Q9Y6M4 447 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 SLC30A1Q9Y6M5 507 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 NAV2Q8IVL1 2488 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 TENM4Q6N022 2769 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 TRBV5-4A0A0C4DH59 114 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 FPGTO14772 594 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 RAD51BO15315 384 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 SOD1P00441 154 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 GOT2P00505 430 aaKnown RBP17.05■□□□□ 0.32
CCS-204ENST00000526066 CSF2P04141 144 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 ABHD2P08910 425 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 GIMD1P0DJR0 217 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 NME1P15531 152 aaKnown RBP17.05■□□□□ 0.32
CCS-204ENST00000526066 ITGALP20701 1170 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 FOXN2P32314 431 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 PHBP35232 272 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 CACNG1Q06432 222 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 NFATC2Q13469 925 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 IRF4Q15306 451 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 NR0B2Q15466 257 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 PNCKQ6P2M8 343 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 ADAMTSL4Q6UY14 1074 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 CCDC81Q6ZN84 652 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 GPR150Q8NGU9 434 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 WDR48Q8TAF3 677 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 GABPB2Q8TAK5 448 aaPredicted RBP17.05■□□□□ 0.32
CCS-204ENST00000526066 ZNF398Q8TD17 642 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 BTN2A2Q8WVV5 523 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 MED8Q96G25 268 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 VPS35Q96QK1 796 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 SPATA16Q9BXB7 569 aa17.05■□□□□ 0.32
CCS-204ENST00000526066 MBNL1Q9NR56 388 aaKnown RBP17.05■□□□□ 0.32
CCS-204ENST00000526066 C20orf96Q9NUD7 363 aaPredicted RBP17.05■□□□□ 0.32
CCS-204ENST00000526066 LRRK1Q38SD2 2015 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 ZNF106Q9H2Y7 1883 aaKnown RBP17.04■□□□□ 0.32
CCS-204ENST00000526066 SPTY2D1-AS1A0A0U1RR47 76 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 TCRBV9S1A1TA0A576 114 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 TOR1BO14657 336 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 AQP9O43315 295 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 TCEA3O75764 348 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 STX2P32856 288 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 IGFALSP35858 605 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 TRIM23P36406 574 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 GPR1P46091 355 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 THOP1P52888 689 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 KCNC4Q03721 635 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 MGAT5Q09328 741 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 THOC5Q13769 683 aaKnown RBP17.04■□□□□ 0.32
CCS-204ENST00000526066 PDE1CQ14123 709 aaPredicted RBP17.04■□□□□ 0.32
CCS-204ENST00000526066 FASTKD1Q53R41 847 aaKnown RBP17.04■□□□□ 0.32
CCS-204ENST00000526066 RAET1GQ6H3X3 334 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 NEPROQ6NW34 567 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 TRMT10BQ6PF06 316 aaKnown RBP17.04■□□□□ 0.32
CCS-204ENST00000526066 KCNMB4Q86W47 210 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 MREGQ8N565 214 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 CALML6Q8TD86 181 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 LMX1AQ8TE12 382 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 NAT6Q93015 286 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.04■□□□□ 0.32
CCS-204ENST00000526066 ULK4Q96C45 1275 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 ATXN7L3BQ96GX2 97 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 AGAP2Q99490 1192 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 FAM167BQ9BTA0 163 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 ASB8Q9H765 288 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 SYNDIG1Q9H7V2 258 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 VPS37BQ9H9H4 285 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 CATSPERZQ9NTU4 200 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 PCDHGA8Q9Y5G5 932 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 MGAQ8IWI9 3026 aa17.04■□□□□ 0.32
CCS-204ENST00000526066 OR51F1A6NGY5 319 aa17.03■□□□□ 0.32
CCS-204ENST00000526066 FADS2P1A8MWK0 482 aa17.03■□□□□ 0.32
CCS-204ENST00000526066 CD3EAPO15446 510 aaKnown RBP17.03■□□□□ 0.32
CCS-204ENST00000526066 RIPK2O43353 540 aa17.03■□□□□ 0.32
CCS-204ENST00000526066 SLC28A2O43868 658 aa17.03■□□□□ 0.32
CCS-204ENST00000526066 PCCBP05166 539 aa17.03■□□□□ 0.32
CCS-204ENST00000526066 HOXC4P09017 264 aaPredicted RBP17.03■□□□□ 0.32
CCS-204ENST00000526066 JUNDP17535 347 aa17.03■□□□□ 0.32
CCS-204ENST00000526066 OGNP20774 298 aaKnown RBP17.03■□□□□ 0.32
CCS-204ENST00000526066 MLLT3P42568 568 aaPredicted RBP17.03■□□□□ 0.32
CCS-204ENST00000526066 FZD2Q14332 565 aa17.03■□□□□ 0.32
CCS-204ENST00000526066 DEFB133Q30KQ1 61 aa17.03■□□□□ 0.32
CCS-204ENST00000526066 ATP13A5Q4VNC0 1218 aa17.03■□□□□ 0.32
CCS-204ENST00000526066 ZRANB3Q5FWF4 1079 aa17.03■□□□□ 0.32
CCS-204ENST00000526066 AARS2Q5JTZ9 985 aaKnown RBP17.03■□□□□ 0.32
CCS-204ENST00000526066 LYPLAL1Q5VWZ2 237 aa17.03■□□□□ 0.32
CCS-204ENST00000526066 MRNIPQ6NTE8 343 aa17.03■□□□□ 0.32
CCS-204ENST00000526066 GUSBP11Q6P575 273 aa17.03■□□□□ 0.32
CCS-204ENST00000526066 CERS6Q6ZMG9 384 aa17.03■□□□□ 0.32
CCS-204ENST00000526066 CAPN12Q6ZSI9 719 aa17.03■□□□□ 0.32
CCS-204ENST00000526066 CNTN4Q8IWV2 1026 aa17.03■□□□□ 0.32
CCS-204ENST00000526066 PELI3Q8N2H9 469 aa17.03■□□□□ 0.32
CCS-204ENST00000526066 PLA2G15Q8NCC3 412 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms