RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	PLA2G5	P39877	138 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	CCR2	P41597	374 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	NSG1	P42857	185 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	CCNG1	P51959	295 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	PTPRR	Q15256	657 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	GSTA3	Q16772	222 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	AAK1	Q2M2I8	961 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	ZNF284	Q2VY69	593 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	SYTL3	Q4VX76	610 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	DGKK	Q5KSL6	1271 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	LY6G5C	Q5SRR4	150 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	REP15	Q6BDI9	236 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	ERAP2	Q6P179	960 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	PRMT9	Q6P2P2	845 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	SPATA19	Q7Z5L4	167 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	GRASP	Q7Z6J2	395 aa	Predicted RBP	10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	MYLK4	Q86YV6	388 aa	Predicted RBP	10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	PELI3	Q8N2H9	469 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	CELF5	Q8N6W0	485 aa	Known RBP	10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	HIPK4	Q8NE63	616 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	KLHL32	Q96NJ5	620 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	PLEKHG4B	Q96PX9	1271 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	ZNF382	Q96SR6	550 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	C17orf80	Q9BSJ5	609 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	SPATA16	Q9BXB7	569 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	TRIM15	Q9C019	465 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	EPHX3	Q9H6B9	360 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	SPATS2L	Q9NUQ6	558 aa	Known RBP	10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	DUS2	Q9NX74	493 aa	Known RBP	10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	CCDC167	Q9P0B6	97 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	MCM8	Q9UJA3	840 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	PCTP	Q9UKL6	214 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	INTS6	Q9UL03	887 aa	Known RBP	10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	CLEC4E	Q9ULY5	219 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	BTRC	Q9Y297	605 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	MTF2	Q9Y483	593 aa	Predicted RBP	10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	ATP6AP2	A0A1C7CYW4	349 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	LRRC14B	A6NHZ5	514 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	UPK3BL1	B0FP48	263 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	UPK3BL2	E5RIL1	263 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	TRIM38	O00635	465 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	ATP6AP2	O75787	350 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	NFATC1	O95644	943 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	ESRRB	O95718	433 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	FGF4	P08620	206 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	POU2F2	P09086	479 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	CHRM1	P11229	460 aa	Predicted RBP	10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	TCF3	P15923	654 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	CEBPB	P17676	345 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	GNAZ	P19086	355 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	ME2	P23368	584 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	DGKG	P49619	791 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	CLCN7	P51798	805 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	MTTP	P55157	894 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	KCNK10	P57789	538 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	SH3BP2	P78314	561 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	NTHL1	P78549	312 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	TIAL1	Q01085	375 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	TGFBI	Q15582	683 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	ATP6AP1L	Q52LC2	224 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	ZFP1	Q6P2D0	407 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	CRTC1	Q6UUV9	634 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	MACC1	Q6ZN28	852 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	DPY19L3	Q6ZPD9	716 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	CHSY3	Q70JA7	882 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	DHDDS	Q86SQ9	333 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	TSPAN33	Q86UF1	283 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	PLCD3	Q8N3E9	789 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	TCAIM	Q8N3R3	496 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	NAT16	Q8N8M0	369 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	RIN3	Q8TB24	985 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	GDPD5	Q8WTR4	605 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	DLG3	Q92796	817 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	N4BP2L2	Q92802	583 aa	Predicted RBP	10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	HLA-C	Q95604	372 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	SCRN2	Q96FV2	425 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	PDLIM5	Q96HC4	596 aa	Known RBP	10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	LRGUK	Q96M69	825 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	NSUN5	Q96P11	429 aa	Known RBP	10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	LYSMD1	Q96S90	227 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	CDRT15	Q96T59	188 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	NPAS2	Q99743	824 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	C1QTNF3	Q9BXJ4	246 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	VCX	Q9H320	206 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	S100A14	Q9HCY8	104 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	IL26	Q9NPH9	171 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	GID8	Q9NWU2	228 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	NMRK1	Q9NWW6	199 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	MARK1	Q9P0L2	795 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	OPTC	Q9UBM4	332 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	B4GALT6	Q9UBX8	382 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	IL36A	Q9UHA7	158 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	OARD1	Q9Y530	152 aa		10.62	□□□□□ -0.71
SPIDR-222	ENST00000524006	C5orf42	Q9H799	3197 aa		10.61	□□□□□ -0.71
SPIDR-222	ENST00000524006	TRBV5-4	A0A0C4DH59	114 aa		10.61	□□□□□ -0.71
SPIDR-222	ENST00000524006		A0A0U1RQS6	177 aa		10.61	□□□□□ -0.71
SPIDR-222	ENST00000524006	IQCF5	A8MTL0	148 aa		10.61	□□□□□ -0.71
SPIDR-222	ENST00000524006	EIF3F	O00303	357 aa	Predicted RBP	10.61	□□□□□ -0.71
SPIDR-222	ENST00000524006	QSOX1	O00391	747 aa		10.61	□□□□□ -0.71
SPIDR-222	ENST00000524006	UBFD1	O14562	309 aa	Known RBP	10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms