RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 CCNG2Q16589 344 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 GPR33Q49SQ1 333 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 ZRANB3Q5FWF4 1079 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 SNAP47Q5SQN1 464 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 WDR74Q6RFH5 385 aaPredicted RBP15.3■□□□□ 0.04
CLDND1-211ENST00000506575 TMEM26Q6ZUK4 368 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 GSTA5Q7RTV2 222 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 RBM12BQ8IXT5 1001 aaKnown RBP15.3■□□□□ 0.04
CLDND1-211ENST00000506575 NXPE1Q8N323 547 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 AGBL5Q8NDL9 886 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 OR52K1Q8NGK4 314 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 AHCTF1Q8WYP5 2266 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 SGF29Q96ES7 293 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 CRELD1Q96HD1 420 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 DNAJC1Q96KC8 554 aaKnown RBP15.3■□□□□ 0.04
CLDND1-211ENST00000506575 COPS8Q99627 209 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 TBC1D10AQ9BXI6 508 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 TLR10Q9BXR5 811 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 FAM96AQ9H5X1 160 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 UCK1Q9HA47 277 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 ETNK1Q9HBU6 452 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 RAB6BQ9NRW1 208 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 NLE1Q9NVX2 485 aaPredicted RBP15.3■□□□□ 0.04
CLDND1-211ENST00000506575 TMEM9Q9P0T7 183 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 PAK5Q9P286 719 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 ZNF624Q9P2J8 865 aaPredicted RBP15.3■□□□□ 0.04
CLDND1-211ENST00000506575 ZKSCAN5Q9Y2L8 839 aa15.3■□□□□ 0.04
CLDND1-211ENST00000506575 KLHL33A6NCF5 533 aa15.29■□□□□ 0.04
CLDND1-211ENST00000506575 OR52A4PA6NMU1 304 aa15.29■□□□□ 0.04
CLDND1-211ENST00000506575 CCL22O00626 93 aa15.29■□□□□ 0.04
CLDND1-211ENST00000506575 BRAFP15056 766 aa15.29■□□□□ 0.04
CLDND1-211ENST00000506575 ETV5P41161 510 aa15.29■□□□□ 0.04
CLDND1-211ENST00000506575 TMPRSS3P57727 454 aa15.29■□□□□ 0.04
CLDND1-211ENST00000506575 LAMB3Q13751 1172 aa15.29■□□□□ 0.04
CLDND1-211ENST00000506575 TAS2R42Q7RTR8 314 aa15.29■□□□□ 0.04
CLDND1-211ENST00000506575 PLXDC1Q8IUK5 500 aa15.29■□□□□ 0.04
CLDND1-211ENST00000506575 BEND7Q8N7W2 519 aaPredicted RBP15.29■□□□□ 0.04
CLDND1-211ENST00000506575 STYXQ8WUJ0 223 aa15.29■□□□□ 0.04
CLDND1-211ENST00000506575 USP7Q93009 1102 aa15.29■□□□□ 0.04
CLDND1-211ENST00000506575 FCRL3Q96P31 734 aaPredicted RBP15.29■□□□□ 0.04
CLDND1-211ENST00000506575 PSMD13Q9UNM6 376 aa15.29■□□□□ 0.04
CLDND1-211ENST00000506575 PRAMEF33A0A0G2JMD5 474 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 MGAT4DA6NG13 374 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 AGAP14A8MT82 685 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 A8MU76 341 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 H7C0S8 307 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 PRAMEF10O60809 474 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 UBXN7O94888 489 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 CCL4P13236 92 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 ETS1P14921 441 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 AMD1P17707 334 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 CXCR5P32302 372 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 CXADRP78310 365 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 SEMA5AQ13591 1074 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 NFE2L1Q14494 772 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 SIX1Q15475 284 aaPredicted RBP15.28■□□□□ 0.04
CLDND1-211ENST00000506575 SKIDA1Q1XH10 827 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 BCL7AQ4VC05 210 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 DRICH1Q6PGQ1 229 aaPredicted RBP15.28■□□□□ 0.04
CLDND1-211ENST00000506575 FAM129CQ86XR2 697 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 SLC40A1Q9NP59 571 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 HOMER3Q9NSC5 361 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 ZDHHC3Q9NYG2 299 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 FAM8A1Q9UBU6 413 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 KLHL3Q9UH77 587 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 DRG1Q9Y295 367 aaKnown RBP15.28■□□□□ 0.04
CLDND1-211ENST00000506575 WDR37Q9Y2I8 494 aa15.28■□□□□ 0.04
CLDND1-211ENST00000506575 CCDC78A2IDD5 438 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 HEATR9A2RTY3 570 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 SUN1O94901 812 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 APRTP07741 180 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 ATP1B2P14415 290 aaPredicted RBP15.27■□□□□ 0.04
CLDND1-211ENST00000506575 TYRP1P17643 537 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 CACNG1Q06432 222 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 GPR18Q14330 331 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 CLCA4Q14CN2 919 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 CCDC38Q502W7 563 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 METRNLQ641Q3 311 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 C4orf22Q6V702 233 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 FAM83HQ6ZRV2 1179 aaPredicted RBP15.27■□□□□ 0.04
CLDND1-211ENST00000506575 PRUNE1Q86TP1 453 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 SERPINA9Q86WD7 417 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 OR2L2Q8NH16 312 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 NAT14Q8WUY8 206 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 ANP32BQ92688 251 aaKnown RBP15.27■□□□□ 0.04
CLDND1-211ENST00000506575 CDKN2AIPNLQ96HQ2 116 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 TAAR9Q96RI9 348 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 B3GNT4Q9C0J1 378 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 PRORYQ9H606 182 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 VPS37BQ9H9H4 285 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 IMP3Q9NV31 184 aaKnown RBP15.27■□□□□ 0.04
CLDND1-211ENST00000506575 PDP2Q9P2J9 529 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 ACSL6Q9UKU0 697 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 ACSL5Q9ULC5 683 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 JRKLQ9Y4A0 524 aa15.27■□□□□ 0.04
CLDND1-211ENST00000506575 CACNA1GO43497 2377 aa15.27■□□□□ 0.03
CLDND1-211ENST00000506575 TRBV5-4A0A0C4DH59 114 aa15.26■□□□□ 0.03
CLDND1-211ENST00000506575 MROH6A6NGR9 719 aa15.26■□□□□ 0.03
CLDND1-211ENST00000506575 EFCAB7A8K855 629 aa15.26■□□□□ 0.03
CLDND1-211ENST00000506575 ZSCAN12O43309 604 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms