RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-215ENST00000506161 IMPACTQ9P2X3 320 aa16.43■□□□□ 0.22
PDLIM7-215ENST00000506161 MN1Q10571 1320 aaPredicted RBP16.43■□□□□ 0.22
PDLIM7-215ENST00000506161 C5orf60A6NFR6 353 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 STX7O15400 261 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 LDB2O43679 373 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 KIF1CO43896 1103 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 ANXA9O76027 345 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 TJP3O95049 919 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 C9P02748 559 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 TPH1P17752 444 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 LPOP22079 712 aaPredicted RBP16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 EPHA4P54764 986 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 CYP4F2P78329 520 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 SRSF1Q07955 248 aaKnown RBP eCLIP16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 KIF5AQ12840 1032 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 GPR18Q14330 331 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 FAM129CQ86XR2 697 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 AGBL5Q8NDL9 886 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 ZNF398Q8TD17 642 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 NKD1Q969G9 470 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 SGF29Q96ES7 293 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 CALR3Q96L12 384 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 TAAR9Q96RI9 348 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 TBL1YQ9BQ87 522 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 SLC40A1Q9NP59 571 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 SMOXQ9NWM0 555 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 SIDT1Q9NXL6 827 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 PCDHGA3Q9Y5H0 932 aa16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 CFAP20Q9Y6A4 193 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-215ENST00000506161 OR5K4A6NMS3 321 aa16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 AGAP14A8MT82 685 aa16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 SRP72O76094 671 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 CSTF2P33240 577 aaKnown RBP eCLIP16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 PPM1FP49593 454 aaPredicted RBP16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 LINC00303Q3SY05 128 aa16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 FNBP1LQ5T0N5 605 aa16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 AGAP9Q5VTM2 703 aa16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 WASH2PQ6VEQ5 465 aa16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 TIPARPQ7Z3E1 657 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 GLIS1Q8NBF1 620 aa16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 SPDYE1Q8NFV5 336 aaPredicted RBP16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 BRSK1Q8TDC3 778 aa16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 RTP4Q96DX8 246 aa16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 DNAJC1Q96KC8 554 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 ZMYND15Q9H091 742 aa16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 ASB8Q9H765 288 aa16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 ARNT2Q9HBZ2 717 aa16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 WASH6PQ9NQA3 447 aa16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 SLC39A1Q9NY26 324 aa16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 FAM8A1Q9UBU6 413 aa16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 PKP3Q9Y446 797 aa16.41■□□□□ 0.22
PDLIM7-215ENST00000506161 CCDC78A2IDD5 438 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 MIF4GDA9UHW6 222 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 B4E171 279 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 VIPP01282 170 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 ETS1P14921 441 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 IDSP22304 550 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 TSPAN7P41732 249 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 CSRP3P50461 194 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 SH3BP2P78314 561 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 DMPKQ09013 629 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 RPE65Q16518 533 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 LDLRAP1Q5SW96 308 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 EXD3Q8N9H8 876 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 SH3KBP1Q96B97 665 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 MED8Q96G25 268 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 DPYSL5Q9BPU6 564 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 UCK1Q9HA47 277 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 GUCA1BQ9UMX6 200 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 AAR2Q9Y312 384 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 PCDHGA4Q9Y5G9 962 aa16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 SNRNP200O75643 2136 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-215ENST00000506161 UBXN7O94888 489 aa16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 SLC2A4P14672 509 aa16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 ZNF28P17035 718 aa16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 GRIA1P42261 906 aa16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 MC2RQ01718 297 aa16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 ITGA9Q13797 1035 aa16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 GTF2H3Q13889 308 aa16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 SIX1Q15475 284 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 OASLQ15646 514 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 ZNF658BQ4V348 819 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 CERS6Q6ZMG9 384 aa16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 AMZ2Q86W34 360 aa16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 UBL4BQ8N7F7 174 aa16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 C9orf72Q96LT7 481 aa16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 RMDN2Q96LZ7 410 aa16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 TGM7Q96PF1 710 aa16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 INSM2Q96T92 566 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 DDA1Q9BW61 102 aa16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 B3GNT4Q9C0J1 378 aa16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 WWP1Q9H0M0 922 aa16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 STN1Q9H668 368 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 POT1Q9NUX5 634 aa16.39■□□□□ 0.21
PDLIM7-215ENST00000506161 OR51F1A6NGY5 319 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 C2orf81A6NN90 581 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms