RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 CBSP35520 551 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 MSX2P35548 267 aaPredicted RBP11.82□□□□□ -0.52
NUP54-202ENST00000502850 EEFSECP57772 596 aaKnown RBP11.82□□□□□ -0.52
NUP54-202ENST00000502850 SNRPD1P62314 119 aaKnown RBP11.82□□□□□ -0.52
NUP54-202ENST00000502850 MAD2L1Q13257 205 aaPredicted RBP11.82□□□□□ -0.52
NUP54-202ENST00000502850 NFATC2Q13469 925 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 NFYCQ13952 458 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 ADRM1Q16186 407 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 LIN52Q52LA3 116 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 C9orf50Q5SZB4 431 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 ATXN7L2Q5T6C5 722 aaPredicted RBP11.82□□□□□ -0.52
NUP54-202ENST00000502850 MACC1Q6ZN28 852 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 RETREG3Q86VR2 466 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 ARL14EPQ8N8R7 260 aaPredicted RBP11.82□□□□□ -0.52
NUP54-202ENST00000502850 FIBINQ8TAL6 211 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 SLC30A3Q99726 388 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 PCDHAC1Q9H158 963 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 EPB41L1Q9H4G0 881 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 ASB8Q9H765 288 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 RC3H2Q9HBD1 1191 aaKnown RBP11.82□□□□□ -0.52
NUP54-202ENST00000502850 IL21Q9HBE4 155 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 HEBP1Q9NRV9 189 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 ABCB8Q9NUT2 735 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 CRLS1Q9UJA2 301 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 TBX21Q9UL17 535 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 FNDC3AQ9Y2H6 1198 aaKnown RBP11.82□□□□□ -0.52
NUP54-202ENST00000502850 FFAR2O15552 330 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 WDR47O94967 919 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 UMPSP11172 480 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 ARSAP15289 507 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 CTPS1P17812 591 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 GABRR2P28476 465 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 AGTR2P50052 363 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 POLR2JP52435 117 aaKnown RBP11.82□□□□□ -0.52
NUP54-202ENST00000502850 HK3P52790 923 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 PRKG2Q13237 762 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 GTF2H2Q13888 395 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 MAP7Q14244 749 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 TLR1Q15399 786 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 VPS26BQ4G0F5 336 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 CDKL4Q5MAI5 379 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 GTF2H2CQ6P1K8 395 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 FAM151BQ6UXP7 276 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 USP45Q70EL2 814 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 ZBTB2Q8N680 514 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 ANKFN1Q8N957 763 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 FNDC5Q8NAU1 212 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 METTL6Q8TCB7 284 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 ADAMTS19Q8TE59 1207 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 UBTD2Q8WUN7 234 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 ISG20Q96AZ6 181 aaKnown RBP11.82□□□□□ -0.52
NUP54-202ENST00000502850 ULK4Q96C45 1275 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 ZNF597Q96LX8 424 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 PPP3R2Q96LZ3 170 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 MRPS26Q9BYN8 205 aaKnown RBP11.82□□□□□ -0.52
NUP54-202ENST00000502850 TM6SF2Q9BZW4 377 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 CIPCQ9C0C6 399 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 ZNF696Q9H7X3 374 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 RDH14Q9HBH5 336 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 ZNF334Q9HCZ1 680 aaPredicted RBP11.82□□□□□ -0.52
NUP54-202ENST00000502850 CCM2LQ9NUG4 571 aaPredicted RBP11.82□□□□□ -0.52
NUP54-202ENST00000502850 MAP10Q9P2G4 905 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 CNOT6Q9ULM6 557 aaKnown RBP11.82□□□□□ -0.52
NUP54-202ENST00000502850 PADI4Q9UM07 663 aa11.82□□□□□ -0.52
NUP54-202ENST00000502850 DHRS12A0PJE2 317 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 FXYD1O00168 92 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 NME4O00746 187 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 SYNCRIPO60506 623 aaKnown RBP11.81□□□□□ -0.52
NUP54-202ENST00000502850 ARHGEF15O94989 841 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 TIMP1P01033 207 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 FAM58BPP0C7Q3 252 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 PABPC4LP0CB38 370 aaKnown RBP11.81□□□□□ -0.52
NUP54-202ENST00000502850 C7P10643 843 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 BMP2P12643 396 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 SLC6A2P23975 617 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 HMOX2P30519 316 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 ARL1P40616 181 aaPredicted RBP11.81□□□□□ -0.52
NUP54-202ENST00000502850 GRIA3P42263 894 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 NSG1P42857 185 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 ATXN3P54252 364 aaPredicted RBP11.81□□□□□ -0.52
NUP54-202ENST00000502850 NME5P56597 212 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 EMX2Q04743 252 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 FPGSQ05932 587 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 PLEKHG6Q3KR16 790 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 RNF220Q5VTB9 566 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 TXNDC8Q6A555 127 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 FAM109BQ6ICB4 259 aaPredicted RBP11.81□□□□□ -0.52
NUP54-202ENST00000502850 SULT1C3Q6IMI6 304 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 FBXL19Q6PCT2 694 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 SBSNQ6UWP8 590 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 TPGS1Q6ZTW0 290 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 ERMP1Q7Z2K6 904 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 GOLGA7Q7Z5G4 137 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 PTRH1Q86Y79 214 aaKnown RBP11.81□□□□□ -0.52
NUP54-202ENST00000502850 CAMK1DQ8IU85 385 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 SLC15A3Q8IY34 581 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 TMEM199Q8N511 208 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 OR2AP1Q8NGE2 309 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 PPWD1Q96BP3 646 aaKnown RBP11.81□□□□□ -0.52
NUP54-202ENST00000502850 SLC45A3Q96JT2 553 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms